DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsepi and Glce

DIOPT Version :10

Sequence 1:NP_610249.2 Gene:Hsepi / 35569 FlyBaseID:FBgn0033087 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001414556.1 Gene:Glce / 363073 RGDID:1565253 Length:618 Species:Rattus norvegicus


Alignment Length:625 Identity:273/625 - (43%)
Similarity:364/625 - (58%) Gaps:67/625 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RLNLKAVLLVLTVAVVVITLGVYMRCAAFSFSPDFVRPLD----------RSARQSS-------- 90
            |:|.| .|:::.....::|:.::.:|:: ..:..|.|.|.          |||...|        
  Rat     7 RVNYK-TLIIICALFTLVTVLLWNKCSS-DKAIQFPRHLSSGFRVDGLEKRSAASESNHYANHIA 69

  Fly    91 -----------------------SGGEATAL----HDIECSINQEYTVHCKRDENANEVYVPFSF 128
                                   |.|.:..|    .:|:|.||.|:|:..:|:  .|||::||::
  Rat    70 KQQSEEAFPQEQQKAPPVVGGFNSNGGSKVLGLKYEEIDCLINDEHTIRGRRE--GNEVFLPFTW 132

  Fly   129 LRNYFDVSGAVSTNSNEVAKFNWVHSTAKVNLPRGKYDARGVYMYFENYNVEVRDRVKCISAAEG 193
            :..||||.|.| ...:...:|.:.||.:||...|..|...||:|.||.|||||||||||||..||
  Rat   133 VEKYFDVYGKV-VQYDGYDRFEFSHSYSKVYAQRSPYHPDGVFMSFEGYNVEVRDRVKCISGVEG 196

  Fly   194 VPVSTQWEKRGYFYPTQIAQFALSHYSKNLTEPAPRVRV---LEDGDGN--QMEWSTPKTSNMTR 253
            ||:||||..:|||||.||||:.||||||||||..|.:.|   .||.|.|  ..||:.||...|..
  Rat   197 VPLSTQWGPQGYFYPIQIAQYGLSHYSKNLTEKPPHIEVYETAEDRDRNIRPNEWTVPKGCFMAS 261

  Fly   254 IWHHKFNTSVVQFETAPGYEGVISIALNQTLDLLLSVDLLLVTNSSSLMITVQNRDTRHNYSLHY 318
            :.....:|:|.||......||| |:.|..|.|.::|.||..:|| .|:.:.::..|....:::||
  Rat   262 VADKSRSTNVKQFIAPEAGEGV-SLQLGNTKDFIISFDLKFLTN-GSVSVVLETTDKNQLFTVHY 324

  Fly   319 IPADLLLSVQDTNIYYGLGGSALNKWRHITRDLHIDLQKGI-MGDKRS--PLKIRRSDLEVISIG 380
            :....|::.:|.:||||:|  ....|..:||||..||:||: :.:.::  |.||...  :|:.:.
  Rat   325 VSNTQLIAFKDRDIYYGIG--PRTSWSTVTRDLVTDLRKGVGLSNTKAVKPTKIMPK--KVVRLI 385

  Fly   381 FLGLGFFDNITLSTSDHLAHFYDAAEWFVHNQDPKTGGWTNPVRRSL-NGFAELRPGWISAMGQG 444
            ..|.||.||||:||:.|:|.|:.|::|.|.|||.| |||...|.|.| .||..|.|||.|||.||
  Rat   386 AKGKGFLDNITISTTAHMAAFFAASDWLVRNQDEK-GGWPIMVTRKLGEGFKSLEPGWYSAMAQG 449

  Fly   445 HAISVLARAYWHSGGDERYLRAAAAGLQPYRVYSRDGGVLAQFMDKFYWYEEYPTTPPSYVLNGF 509
            .|||.|.|||..: .|..:|.:|.....||:..|...||.|.||:|..|||||||||.|:|||||
  Rat   450 QAISTLVRAYLLT-KDYVFLNSALRATAPYKFLSEQHGVKAVFMNKHDWYEEYPTTPSSFVLNGF 513

  Fly   510 IYSLLGLYDLNSTAPGKIAREAGKLFAQGMHSLKKMLLLFDTGSGTSYDLRHLSLGVAPNLARWD 574
            :|||:|||||..||..|:.:||..|:.:||.|||.||.|:||||||.|||||..||:||||||||
  Rat   514 MYSLIGLYDLKETAGEKLGKEARSLYERGMESLKAMLPLYDTGSGTIYDLRHFMLGIAPNLARWD 578

  Fly   575 YHATHVNQLLLLATIDSDPLIAQTAERWKGYMFGRRAKHN 614
            ||.||:|||.||:|||..|:..:..:|||.|:.|.|||||
  Rat   579 YHTTHINQLQLLSTIDESPIFKEFVKRWKSYLKGSRAKHN 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HsepiNP_610249.2 C5-epim_C 415..604 CDD:461978 110/189 (58%)
GlceNP_001414556.1 None

Return to query results.
Submit another query.