DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsepi and Glce

DIOPT Version :9

Sequence 1:NP_610249.2 Gene:Hsepi / 35569 FlyBaseID:FBgn0033087 Length:614 Species:Drosophila melanogaster
Sequence 2:XP_017451539.1 Gene:Glce / 363073 RGDID:1565253 Length:618 Species:Rattus norvegicus


Alignment Length:625 Identity:273/625 - (43%)
Similarity:364/625 - (58%) Gaps:67/625 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RLNLKAVLLVLTVAVVVITLGVYMRCAAFSFSPDFVRPLD----------RSARQSS-------- 90
            |:|.| .|:::.....::|:.::.:|:: ..:..|.|.|.          |||...|        
  Rat     7 RVNYK-TLIIICALFTLVTVLLWNKCSS-DKAIQFPRHLSSGFRVDGLEKRSAASESNHYANHIA 69

  Fly    91 -----------------------SGGEATAL----HDIECSINQEYTVHCKRDENANEVYVPFSF 128
                                   |.|.:..|    .:|:|.||.|:|:..:|:  .|||::||::
  Rat    70 KQQSEEAFPQEQQKAPPVVGGFNSNGGSKVLGLKYEEIDCLINDEHTIRGRRE--GNEVFLPFTW 132

  Fly   129 LRNYFDVSGAVSTNSNEVAKFNWVHSTAKVNLPRGKYDARGVYMYFENYNVEVRDRVKCISAAEG 193
            :..||||.|.| ...:...:|.:.||.:||...|..|...||:|.||.|||||||||||||..||
  Rat   133 VEKYFDVYGKV-VQYDGYDRFEFSHSYSKVYAQRSPYHPDGVFMSFEGYNVEVRDRVKCISGVEG 196

  Fly   194 VPVSTQWEKRGYFYPTQIAQFALSHYSKNLTEPAPRVRV---LEDGDGN--QMEWSTPKTSNMTR 253
            ||:||||..:|||||.||||:.||||||||||..|.:.|   .||.|.|  ..||:.||...|..
  Rat   197 VPLSTQWGPQGYFYPIQIAQYGLSHYSKNLTEKPPHIEVYETAEDRDRNIRPNEWTVPKGCFMAS 261

  Fly   254 IWHHKFNTSVVQFETAPGYEGVISIALNQTLDLLLSVDLLLVTNSSSLMITVQNRDTRHNYSLHY 318
            :.....:|:|.||......||| |:.|..|.|.::|.||..:|| .|:.:.::..|....:::||
  Rat   262 VADKSRSTNVKQFIAPEAGEGV-SLQLGNTKDFIISFDLKFLTN-GSVSVVLETTDKNQLFTVHY 324

  Fly   319 IPADLLLSVQDTNIYYGLGGSALNKWRHITRDLHIDLQKGI-MGDKRS--PLKIRRSDLEVISIG 380
            :....|::.:|.:||||:|  ....|..:||||..||:||: :.:.::  |.||...  :|:.:.
  Rat   325 VSNTQLIAFKDRDIYYGIG--PRTSWSTVTRDLVTDLRKGVGLSNTKAVKPTKIMPK--KVVRLI 385

  Fly   381 FLGLGFFDNITLSTSDHLAHFYDAAEWFVHNQDPKTGGWTNPVRRSL-NGFAELRPGWISAMGQG 444
            ..|.||.||||:||:.|:|.|:.|::|.|.|||.| |||...|.|.| .||..|.|||.|||.||
  Rat   386 AKGKGFLDNITISTTAHMAAFFAASDWLVRNQDEK-GGWPIMVTRKLGEGFKSLEPGWYSAMAQG 449

  Fly   445 HAISVLARAYWHSGGDERYLRAAAAGLQPYRVYSRDGGVLAQFMDKFYWYEEYPTTPPSYVLNGF 509
            .|||.|.|||..: .|..:|.:|.....||:..|...||.|.||:|..|||||||||.|:|||||
  Rat   450 QAISTLVRAYLLT-KDYVFLNSALRATAPYKFLSEQHGVKAVFMNKHDWYEEYPTTPSSFVLNGF 513

  Fly   510 IYSLLGLYDLNSTAPGKIAREAGKLFAQGMHSLKKMLLLFDTGSGTSYDLRHLSLGVAPNLARWD 574
            :|||:|||||..||..|:.:||..|:.:||.|||.||.|:||||||.|||||..||:||||||||
  Rat   514 MYSLIGLYDLKETAGEKLGKEARSLYERGMESLKAMLPLYDTGSGTIYDLRHFMLGIAPNLARWD 578

  Fly   575 YHATHVNQLLLLATIDSDPLIAQTAERWKGYMFGRRAKHN 614
            ||.||:|||.||:|||..|:..:..:|||.|:.|.|||||
  Rat   579 YHTTHINQLQLLSTIDESPIFKEFVKRWKSYLKGSRAKHN 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HsepiNP_610249.2 C5-epim_C 415..604 CDD:284151 110/189 (58%)
GlceXP_017451539.1 C5-epim_C 417..608 CDD:399566 112/192 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342035
Domainoid 1 1.000 241 1.000 Domainoid score I2179
eggNOG 1 0.900 - - E1_KOG3760
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H14111
Inparanoid 1 1.050 472 1.000 Inparanoid score I1454
OMA 1 1.010 - - QHG49344
OrthoDB 1 1.010 - - D257141at33208
OrthoFinder 1 1.000 - - FOG0006406
OrthoInspector 1 1.000 - - oto96366
orthoMCL 1 0.900 - - OOG6_106888
Panther 1 1.100 - - LDO PTHR13174
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4669
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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