DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9410 and coq10b

DIOPT Version :10

Sequence 1:NP_724484.1 Gene:CG9410 / 35568 FlyBaseID:FBgn0033086 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_001017747.1 Gene:coq10b / 550442 ZFINID:ZDB-GENE-050417-263 Length:238 Species:Danio rerio


Alignment Length:224 Identity:93/224 - (41%)
Similarity:128/224 - (57%) Gaps:27/224 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 RSAGKCKLHNP----RPTPNRNIAAAKLIVTLRLLLSCCSGGHQ--------RSFSS----STHR 70
            |:..:|..:.|    |.||.::        .:|.|.||   |..        |:.||    :..|
Zfish    10 RAVAECIRNLPSTAGRETPGKS--------GVRYLSSC---GILMTRAPPLFRAVSSRAVVAPAR 63

  Fly    71 SYITFNDFRKKHRWYTKKELVGYSMQDMYSVVSDVSNYHKFVPYVKRSDVHSRGSEGFKADLIVG 135
            |:..|.:...|.:.|:::.::|||||:||.||:.|.:|..|||:.|:|||..|.|...||.|.||
Zfish    64 SFFNFAESSNKRKEYSERRIIGYSMQEMYEVVAKVEDYLLFVPWCKKSDVIFRRSGFCKAKLTVG 128

  Fly   136 FPPLNEAYTSQVTLVPPSLVKSECHDGRLFNYLLNEWSFKPGLKDIPNSCVLDFKVSFEFKSLLH 200
            |||:.|.|||.|:.|.|.|||:.|.||:|||:|...|.|.|||...|.:|.|||.:||||:||||
Zfish   129 FPPVVENYTSLVSTVRPHLVKASCSDGKLFNHLETVWRFSPGLPGYPRTCTLDFAISFEFRSLLH 193

  Fly   201 SNVANIFFDLICDQMENAFIQEVRRRSGP 229
            |.:|.:|||.:..||.:||.:...:..||
Zfish   194 SQLATVFFDEVVKQMVSAFERRASKLYGP 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9410NP_724484.1 COQ10p_like 85..226 CDD:176855 73/140 (52%)
coq10bNP_001017747.1 COQ10p_like 78..219 CDD:176855 73/140 (52%)

Return to query results.
Submit another query.