DRSC/TRiP Functional Genomics Resources

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Protein Alignment geminin and GMNC

DIOPT Version :9

Sequence 1:NP_001260727.1 Gene:geminin / 35563 FlyBaseID:FBgn0033081 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001140158.1 Gene:GMNC / 647309 HGNCID:40049 Length:334 Species:Homo sapiens


Alignment Length:120 Identity:30/120 - (25%)
Similarity:46/120 - (38%) Gaps:29/120 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 TAPAISTKDADTQT-------------DAEAVPLGN---ADKPITAEDLTSTAEPGENYYKLLAE 123
            |..:.|:.|..|:|             :.:..|...   :|......||.|..|      ..|:.
Human    24 TTTSESSVDVSTETWVSFWAAGLLDNRELQQAPQAQESFSDSNFPLPDLCSWEE------AQLSS 82

  Fly   124 Q--RRLALEDSLTENRHLHERIEGLEEEMDTMRQELDEA--KNLVEVLKEICEED 174
            |  |...|:|:|.:.   .|.:..|.||.:.:||.|:.|  |.|.|..|::...|
Human    83 QLYRNKQLQDTLVQK---EEELARLHEENNHLRQYLNSALVKCLEEKAKKLLSSD 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gemininNP_001260727.1 Geminin 25..188 CDD:284760 30/120 (25%)
GMNCNP_001140158.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..167
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165144703
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13372
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.030

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