DRSC/TRiP Functional Genomics Resources

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Protein Alignment geminin and gmnn

DIOPT Version :10

Sequence 1:NP_610218.1 Gene:geminin / 35563 FlyBaseID:FBgn0033081 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001034825.1 Gene:gmnn / 496859 XenbaseID:XB-GENE-966994 Length:219 Species:Xenopus tropicalis


Alignment Length:219 Identity:61/219 - (27%)
Similarity:90/219 - (41%) Gaps:67/219 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EAEQ-----KEHLKQQ-------RQTLKPLQGNVN------DKENLTGSGRASI-VDQLSRLKAG 60
            :|||     |.:|..:       |:|||.:|.:.:      .||.:..|.:..: .|||:..||.
 Frog    10 DAEQPTMSIKSYLVNKTNEALAPRRTLKVIQPSASGCLVGRTKEPVKNSTKRKLWNDQLTSKKAK 74

  Fly    61 VQVAPKYGKRKCVDTAPAISTKDADTQTDAEAVPLGNADKPITAEDLTSTAEPGENYYKLLAEQR 125
            |:||.....|:         .||..::                |.||.....|...|:|.:||:|
 Frog    75 VEVAVDLEHRE---------NKDCSSE----------------AYDLMIKETPTYLYWKEVAEER 114

  Fly   126 RLALEDSLTENRHLHERIEGLEEEMDTMRQELDEAKNL---------------------VEVLKE 169
            |.||.::|.||..||:.||..:||:..::||.||...|                     :|.||.
 Frog   115 RKALYEALQENEKLHKEIELKDEEIGRLKQENDELMELAGHVQYMANMIERLTGNAPRSLEDLKN 179

  Fly   170 I-CEEDNSEVEEDDTTGD-EDKVN 191
            : .||...|.|.|...|. ||:.:
 Frog   180 LDLEEARFEDEADMADGRLEDETD 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gemininNP_610218.1 Geminin 25..>165 CDD:462159 45/174 (26%)
geminin_CC 115..179 CDD:439143 28/85 (33%)
gmnnNP_001034825.1 Geminin 1..190 CDD:462159 56/204 (27%)

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