DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment geminin and gmnn

DIOPT Version :9

Sequence 1:	NP_001260727.1	Gene:	geminin / 35563	FlyBaseID:	FBgn0033081	Length:	192	Species:	Drosophila melanogaster
Sequence 2:	NP_001034825.1	Gene:	gmnn / 496859	XenbaseID:	XB-GENE-966994	Length:	219	Species:	Xenopus tropicalis

Alignment Length:	219	Identity:	61/219 - (27%)
Similarity:	90/219 - (41%)	Gaps:	67/219 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly    15 EAEQ-----KEHLKQQ-------RQTLKPLQGNVN------DKENLTGSGRASI-VDQLSRLKAG 60
            :|||     |.:|..:       |:|||.:|.:.:      .||.:..|.:..: .|||:..||.
Frog    10 DAEQPTMSIKSYLVNKTNEALAPRRTLKVIQPSASGCLVGRTKEPVKNSTKRKLWNDQLTSKKAK 74

  Fly    61 VQVAPKYGKRKCVDTAPAISTKDADTQTDAEAVPLGNADKPITAEDLTSTAEPGENYYKLLAEQR 125
            |:||.....|:         .||..::                |.||.....|...|:|.:||:|
Frog    75 VEVAVDLEHRE---------NKDCSSE----------------AYDLMIKETPTYLYWKEVAEER 114

  Fly   126 RLALEDSLTENRHLHERIEGLEEEMDTMRQELDEAKNL---------------------VEVLKE 169
            |.||.::|.||..||:.||..:||:..::||.||...|                     :|.||.
Frog   115 RKALYEALQENEKLHKEIELKDEEIGRLKQENDELMELAGHVQYMANMIERLTGNAPRSLEDLKN 179

  Fly   170 I-CEEDNSEVEEDDTTGD-EDKVN 191
            : .||...|.|.|...|. ||:.:
Frog   180 LDLEEARFEDEADMADGRLEDETD 203

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
geminin	NP_001260727.1	Geminin	25..188	CDD:284760	54/199 (27%)
gmnn	NP_001034825.1	Geminin	1..190	CDD:369354	56/204 (27%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1631696at2759
OrthoFinder	1	1.000	-	-		FOG0009565
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010