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Protein Alignment geminin and gmn-1
DIOPT Version :9
Sequence 1: | NP_001260727.1 |
Gene: | geminin / 35563 |
FlyBaseID: | FBgn0033081 |
Length: | 192 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001379042.1 |
Gene: | gmn-1 / 176651 |
WormBaseID: | WBGene00013552 |
Length: | 180 |
Species: | Caenorhabditis elegans |
Alignment Length: | 172 |
Identity: | 42/172 - (24%) |
Similarity: | 76/172 - (44%) |
Gaps: | 30/172 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 33 QGNVNDKENLTGSGRASIVDQL-------SRLKAGVQVAPKYGKRKCVDTAPAISTKDADTQTDA 90
|.|.:.:.:..||.:|:...|: ::||....:.|. .........|.:|..|.....|.
Worm 8 QLNNSARNSPFGSEKATGTKQIPEPLKLTAQLKKYQPITPS-PLASATTITPVLSPFDVFCDDDQ 71
Fly 91 EA------------------VPLGNADKPITAEDLTSTAEPGENYYKLLAEQRRLALEDSLTENR 137
|| :.:.:....||..|||| .:|..||.:::|::.::.|:|.:..|:
Worm 72 EAKNVETQMFEYGTVSTQTIINVPHVQPKITEADLTS-EKPTVNYLRVMADRLQMDLDDEMDRNQ 135
Fly 138 HLHERIEGLEEEMDTMRQELDEAKNLVEVLKEICEEDNSEVE 179
.|...:..|:|: ||:..|:.:.|:|||.:|.||..::.|
Worm 136 RLVAELGDLDEK---MRKIDDDTEILLEVLADIDEEQQTDEE 174
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
geminin | NP_001260727.1 |
Geminin |
25..188 |
CDD:284760 |
42/172 (24%) |
gmn-1 | NP_001379042.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_122582 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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