DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment geminin and gmnc

DIOPT Version :10

Sequence 1:NP_610218.1 Gene:geminin / 35563 FlyBaseID:FBgn0033081 Length:192 Species:Drosophila melanogaster
Sequence 2:XP_009290113.1 Gene:gmnc / 100148564 ZFINID:ZDB-GENE-121211-1 Length:382 Species:Danio rerio


Alignment Length:96 Identity:24/96 - (25%)
Similarity:40/96 - (41%) Gaps:8/96 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 CVDTAPAISTKDADTQTDA---EAVPLGNADKPITAEDLTSTAEPGENYYKLLAEQRRLALEDSL 133
            |..|: |..:.|..|.|..   :|.||.||.:........|..|.|..:.....:|    |...|
Zfish    18 CASTS-ADGSVDVSTTTLVSLWDAGPLDNAARQHEPPRRDSLLESGLGHQPTWHDQ----LSPQL 77

  Fly   134 TENRHLHERIEGLEEEMDTMRQELDEAKNLV 164
            ..|:.|.:.:...|||:..:::|.::.|..:
Zfish    78 QRNKQLQDTLMQREEELARLQEENNKLKEFL 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gemininNP_610218.1 Geminin 25..>165 CDD:462159 24/96 (25%)
geminin_CC 115..179 CDD:439143 10/50 (20%)
gmncXP_009290113.1 GemC1_CC 66..124 CDD:439142 10/47 (21%)

Return to query results.
Submit another query.