DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-2 and Fmo3

DIOPT Version :9

Sequence 1:NP_610217.1 Gene:Fmo-2 / 35561 FlyBaseID:FBgn0033079 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_445885.2 Gene:Fmo3 / 84493 RGDID:619761 Length:531 Species:Rattus norvegicus


Alignment Length:478 Identity:143/478 - (29%)
Similarity:218/478 - (45%) Gaps:114/478 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KRRVCVIGAGTAGLCALKNSLEAGLDAVAYERGTEIGGTWIFSEEMPKDEYDEVHSSMYEGLRTN 72
            ||:|.|||||.:||.|:::.||.||:...:||..::||.|.||     |..:|..:|:|:.:.||
  Rat     2 KRKVAVIGAGVSGLAAIRSCLEEGLEPTCFERSDDVGGLWKFS-----DHTEEGRASIYQSVFTN 61

  Fly    73 LPKEVMGYPDYSYPDDITESFITSNQVLEFLRSYAEHFKLKAHIKLQHEVIRVRPRLD-----DW 132
            ..||:|.:||:.||||. .:|:.::::.|::.|:|....|..:|:.:..|.|:....|     .|
  Rat    62 SSKEMMCFPDFPYPDDF-PNFMHNSKLQEYITSFATEKNLLKYIQFETLVTRINKCPDFSTTGKW 125

  Fly   133 EVYVWDHSTDTCDPVYYDFVYVCNGHYTEPDLPE--VEGLDLFEGNKMHSHLYRKADKFKDARVL 195
            ||....:|..  :...:|.|.:|:||:..|.||:  ..||:.|:|...||..|::...:|..|||
  Rat   126 EVTTEKNSKK--ETAVFDAVMICSGHHVYPHLPKDSFPGLNRFKGKCFHSRDYKEPGTWKGKRVL 188

  Fly   196 IIGAGPSGMDITNHVRLAAKQV-------------------------------FLSHHLSTT--- 226
            :||.|.||.||...:...|:||                               ||.::|.|.   
  Rat   189 VIGLGNSGCDIAAELSHVAQQVIISSRSGSWVMSRVWNDGYPWDMVVITRFQTFLKNNLPTAISD 253

  Fly   227 -----------------------------------PNTAFMGNVTQKPDVKRFTKDGAVFTDGST 256
                                               |.....|.|:.||:||.||:..|||.||:.
  Rat   254 WWYMKQMNARFKHENYGLMPLNGTLRKEPVFNDELPARILCGTVSIKPNVKEFTETSAVFEDGTV 318

  Fly   257 -ESFDHVMFCTGYKYTFPCLSTDVGVQVIDNFVQPLWKHCI--NINHPTMAFVGLPFNV---IPT 315
             |..|.|:|.|||.|.:|.|...: ::..:|.| .|:|...  .:..||||.:||..::   |||
  Rat   319 FEGIDCVIFATGYGYAYPFLDDSI-IKSRNNEV-TLYKGIFPPQLEKPTMAVIGLVQSLGAAIPT 381

  Fly   316 HIFDMQVRFTLKFFTGQRKFPSREQMIADLEQEIGERWGCGVRNQKKAHQMGER------QFVYY 374
              .|:|.|:..:...|....||...|:.|:::::|          ||....|..      ..||.
  Rat   382 --TDLQARWAAQVIRGTCILPSVNDMMDDIDEKMG----------KKLKWFGNSTTIQTDYIVYM 434

  Fly   375 NELASIAGIENIKP-VIHKLMKD 396
            :||||..|   .|| ::...:||
  Rat   435 DELASFIG---AKPNILWLFLKD 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-2NP_610217.1 NADB_Rossmann 12..214 CDD:304358 73/208 (35%)
Fmo3NP_445885.2 FMO-like 2..530 CDD:395602 143/478 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 220 1.000 Inparanoid score I3468
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm9017
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X69
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.780

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