DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-2 and Fmo9

DIOPT Version :9

Sequence 1:NP_610217.1 Gene:Fmo-2 / 35561 FlyBaseID:FBgn0033079 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001102936.1 Gene:Fmo9 / 685365 RGDID:1595083 Length:543 Species:Rattus norvegicus


Alignment Length:465 Identity:141/465 - (30%)
Similarity:218/465 - (46%) Gaps:109/465 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KRRVCVIGAGTAGLCALKNSLEAGLDAVAYERGTEIGGTWIF----SEEMPKDEYDEVHSSMYEG 68
            |:|:.|||||.:||.|:|..|:..|:...:||..:|||.|.|    ||:||         |:|:.
  Rat     3 KKRIAVIGAGISGLGAIKCCLDEDLEPTCFERSDDIGGLWKFQKNPSEKMP---------SIYKS 58

  Fly    69 LRTNLPKEVMGYPDYSYPDDITESFITSNQVLEFLRSYAEHFKLKAHIKLQHEVIRVRPRLD--- 130
            :..|..||:|.:.|:..||.. .:::.:.:::::.|.|||||.|..||:.:..|..||.|.|   
  Rat    59 VTINTSKEMMCFSDFPIPDHF-PNYMHNCKLMDYFRMYAEHFGLLDHIRFKTTVRSVRKRPDFSV 122

  Fly   131 --DWEVYVWDHSTDTCDPVYYDFVYVCNGHYTEPDLP--EVEGLDLFEGNKMHSHLYRKADKFKD 191
              .|:|.|  .:....:.:.:|.:.||:||:|:|.||  ...|::.|||...||..|:..:.:..
  Rat   123 QGQWDVIV--EADGKQESLVFDGILVCSGHHTDPHLPLKSFPGIEKFEGCYFHSREYKSPEDYVG 185

  Fly   192 ARVLIIGAGPSGMDITNHVRLAAKQVFLS--------HH-----------------------LST 225
            .|::::|.|.||:||...:...|||||||        |.                       |||
  Rat   186 KRIIVVGIGNSGVDIAVELGRVAKQVFLSTRRGSWILHRVWNNGYPMDSSFFTRFNSFLQKLLST 250

  Fly   226 --------------------------------------TPNTAFMGNVTQKPDVKRFTKDGAVFT 252
                                                  .||....|.|..||:||.|.....||.
  Rat   251 EAVNKYLEKMMNSRFNHAHYGLQPQHRPLSQHPTVSDDLPNHIISGKVQVKPNVKEFRGTDVVFD 315

  Fly   253 DGST-ESFDHVMFCTGYKYTFPCLSTDVGVQVIDNFVQPLWKHCI--NINHPTMAFVGL--PFNV 312
            ||:. |..|.|:|.|||.::||.|. |: :.|.||.|. |:|...  ::..||:|.:||  |..:
  Rat   316 DGTVEEKIDVVIFATGYSFSFPFLE-DL-IAVTDNEVS-LYKLMFPPDLEKPTLAVIGLIQPLGI 377

  Fly   313 IPTHIFDMQVRFTLKFFTGQRKFPSREQMIADLEQE---IGERWGCGVRNQKKAHQMGERQFVYY 374
            : ..|.::|.|:.::.|.|..|.||.:.|.||:.|.   :.:|:...||     |.:......|.
  Rat   378 V-LPISELQSRWAVRVFKGLSKLPSVKIMNADMAQRKKAMAKRYVKTVR-----HTIQVDHIEYM 436

  Fly   375 NELASIAGIE 384
            :|:|::||::
  Rat   437 DEIAALAGVK 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-2NP_610217.1 NADB_Rossmann 12..214 CDD:304358 71/212 (33%)
Fmo9NP_001102936.1 FMO-like 3..532 CDD:109787 141/465 (30%)
NAD_binding_8 8..>42 CDD:290186 16/33 (48%)
NADB_Rossmann <90..>342 CDD:304358 74/254 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 220 1.000 Inparanoid score I3468
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm9017
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.780

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