DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-2 and si:dkey-239i20.4

DIOPT Version :9

Sequence 1:NP_610217.1 Gene:Fmo-2 / 35561 FlyBaseID:FBgn0033079 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001038299.2 Gene:si:dkey-239i20.4 / 557628 ZFINID:ZDB-GENE-030131-2644 Length:543 Species:Danio rerio


Alignment Length:464 Identity:140/464 - (30%)
Similarity:198/464 - (42%) Gaps:116/464 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RRVCVIGAGTAGLCALKNSLEAGLDAVAYERGTEIGGTWIFSEEMPKDEYDEVHSSMYEGLRTNL 73
            :||.|||||::||.|:|..|:.||:.|.:|...:|||.|.|.|   |.|.|  ..|:|..|..|.
Zfish     3 KRVAVIGAGSSGLAAIKCCLDEGLEPVCFESSDDIGGLWRFRE---KPETD--RCSIYHSLTVNT 62

  Fly    74 PKEVMGYPDYSYPDDITESFITSNQVLEFLRSYAEHFKLKAHIKLQHEVIRVRPRLD-----DWE 133
            .||:|.|.|:..||:. .:|:.::.::::.|.|||||.|...|..|..|..||.|.|     .||
Zfish    63 SKEMMCYSDFPVPDNF-PNFMHNSLIVQYYRLYAEHFNLFERIHFQTTVRSVRQRPDFSVSGQWE 126

  Fly   134 VYVWDHSTDTCDPVYYDFVYVCNGHYTEP--DLPEVEGLDLFEGNKMHSHLYRKADKFKDARVLI 196
            |...|..... :...:|.|.||.||||:|  .|.|..|:|.|.|..:||..|:|.|::...:|||
Zfish   127 VVTADRDGQV-ETHMFDGVLVCVGHYTQPIKPLSEFPGIDTFPGTVIHSWEYKKPDQYIGKKVLI 190

  Fly   197 IGAGPSGMDITNHVRLAAKQVFLS----------------------------------------- 220
            ||.|.||.||...:....::.|||                                         
Zfish   191 IGIGNSGGDIAVELSRTCEKTFLSTRKGSWVIGRMVEKGLPLDMMNISRVQDLMHCLIPRALVNW 255

  Fly   221 -----------HHL-----------------STTPNTAFMGNVTQKPDVKRFTKDGAVFTDGS-T 256
                       |.|                 ...|....:|.:..||:|:.|.....||.||| .
Zfish   256 IGERSLNQRHDHKLYGLQPKHRILDHRPVINDDLPGRILVGELVLKPNVQTFHGSTVVFDDGSIE 320

  Fly   257 ESFDHVMFCTGYKYTFPCL------STDVGVQVIDNFVQPLWKHCININHPTMAFVGL-----PF 310
            |..|.|:.||||.|.||.|      |.|.|:::......|      ::..||:|.:||     | 
Zfish   321 EKIDAVILCTGYDYKFPFLPDSLNSSADGGMKLYRRIFPP------SLERPTLAIIGLLQTRGP- 378

  Fly   311 NVIPTHIFDMQVRFTLKFFTGQRKFPSREQMIADLEQEIGERWGCGVRNQKKAH---QMGERQFV 372
             ::|.  .::|.|:..:...|....||.|:|...:|::|        :...|:|   ::...|..
Zfish   379 -IMPA--AELQARWATRVIKGLNHLPSAEKMSKRIEKDI--------KPYLKSHPCPKLASLQVD 432

  Fly   373 YYNELASIA 381
            |...|.|||
Zfish   433 YIPYLDSIA 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-2NP_610217.1 NADB_Rossmann 12..214 CDD:304358 83/208 (40%)
si:dkey-239i20.4NP_001038299.2 FMO-like 3..530 CDD:109787 140/464 (30%)
NADB_Rossmann 6..206 CDD:304358 83/206 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H101040
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X69
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.730

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