DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-2 and fmo1

DIOPT Version :9

Sequence 1:NP_610217.1 Gene:Fmo-2 / 35561 FlyBaseID:FBgn0033079 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001016366.1 Gene:fmo1 / 549120 XenbaseID:XB-GENE-5731297 Length:539 Species:Xenopus tropicalis


Alignment Length:471 Identity:137/471 - (29%)
Similarity:218/471 - (46%) Gaps:101/471 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RRVCVIGAGTAGLCALKNSLEAGLDAVAYERGTEIGGTWIFSEEMPKDEYDEVHSSMYEGLRTNL 73
            :||.:||||.:||.|:|..||.||:.|.:|:.::|||.|.|:|.:     ::..:|:|:.:.||.
 Frog     3 KRVAIIGAGCSGLTAIKCCLEEGLEPVCFEKSSDIGGLWRFTESV-----EDWRASIYKSVVTNT 62

  Fly    74 PKEVMGYPDYSYPDDITESFITSNQVLEFLRSYAEHFKLKAHIKLQHEVIRVRPRLDDWEVYVWD 138
            .||:|.|.|:..|:|. .:::.:::|||:||.||:||.|..:|:.|.||..|....|......||
 Frog    63 SKEMMCYTDFPMPEDF-PAYLHNSKVLEYLRLYAKHFDLMKYIQFQTEVCSVTKCSDFPSTGQWD 126

  Fly   139 HSTDTCD---PVYYDFVYVCNGHYTEPDLP--EVEGLDLFEGNKMHSHLYRKADKFKDARVLIIG 198
            .:|.|..   ...:|.|.:||||:|:..||  ...|::.|:|:.:||..|:.:..:|...||::|
 Frog   127 IATLTNGIQRNSIFDTVLICNGHHTKHYLPLDSFPGIENFKGHYVHSRFYKDSANYKGKTVLVVG 191

  Fly   199 AGPSGMDITNHVRLAAKQVFLSHH-------------------LST------------------- 225
            .|.|..||...:...||||:||..                   |||                   
 Frog   192 IGNSAGDIAVDISNTAKQVYLSTRGGSWVLSRISKGGCPIDMMLSTRFLTWIRNLLPASFSARLN 256

  Fly   226 -------------------------------TPNTAFMGNVTQKPDVKRFTKDGAVFTDGS-TES 258
                                           .|:....|.:..||.:|.||:...:|.|.: .|:
 Frog   257 ENLMNTWFDHANYGLEPLDRAQLKEPMVNDYLPSCILCGAIKVKPQIKTFTESSVIFEDDTVVEN 321

  Fly   259 FDHVMFCTGYKYTFPCLSTDVGVQVIDNFVQPLWKHCI--NINHPTMAFVGL--PFNVIPTHIFD 319
            .|.|:|.|||..:||.|...   :|||:....|:|...  .|..||:|.:||  |...|.| ..:
 Frog   322 LDEVIFATGYVPSFPFLKDP---EVIDDINALLYKQVFPTRIEKPTLAVLGLVKPLGAILT-AAE 382

  Fly   320 MQVRFTLKFFTGQRKFPSREQMIADLEQ--EIGERWGCGVRNQKKAHQMGERQFV-YYNELASIA 381
            :|.|:..:.|.|....|:..:|...:::  |...:......|||.     :..|: |.:::|...
 Frog   383 LQARWATRIFKGVAHLPTAARMEDYIKKSMEFKTKVFAATPNQKL-----QTYFIDYMDDVAVEI 442

  Fly   382 GIENIKP-VIHKLMKD 396
            |   ::| ::|.|:||
 Frog   443 G---VRPNIMHLLLKD 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-2NP_610217.1 NADB_Rossmann 12..214 CDD:304358 74/206 (36%)
fmo1NP_001016366.1 FMO-like 3..531 CDD:109787 137/471 (29%)
NAD_binding_8 7..>58 CDD:290186 22/55 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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