DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-2 and Fmo4

DIOPT Version :10

Sequence 1:NP_610217.1 Gene:Fmo-2 / 35561 FlyBaseID:FBgn0033079 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_653147.2 Gene:Fmo4 / 246247 RGDID:628601 Length:560 Species:Rattus norvegicus


Alignment Length:480 Identity:125/480 - (26%)
Similarity:204/480 - (42%) Gaps:121/480 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RRVCVIGAGTAGLCALKNSLEAGLDAVAYERGTEIGGTWIFSEEMPKDEYDEVHSSMYEGLRTNL 73
            ::|.|||||.:||.::|..|:..|:...:||.::.||.|.|:|..     ::..:.:|..|.||:
  Rat     3 KKVAVIGAGVSGLSSIKCCLDENLEPTCFERSSDFGGLWKFAEAS-----EDGMTRVYRSLVTNV 62

  Fly    74 PKEVMGYPDYSYPDDITESFITSNQVLEFLRSYAEHFKLKAHIKLQHEVIRVRPRLDDWEVYVWD 138
            .||:..|.|:.:.:|. .:|::..:..::||.:||||.|..:|:.:..|..|..|.|..|...|:
  Rat    63 CKEMSCYSDFPFHEDY-PNFMSHEKFWDYLREFAEHFGLLKYIRFKTTVRSVTKRPDFSETGQWE 126

  Fly   139 HSTDT---CDPVYYDFVYVCNGHYTEPDLP--EVEGLDLFEGNKMHSHLYRKADKFKDARVLIIG 198
            ..|:|   .|...:|.|.||.|.:..|.||  ...|:..|:|..:||..||..|.|:..|:|::|
  Rat   127 VVTETEGKQDRAVFDAVMVCTGQFLSPRLPLESFPGIHKFKGQILHSQEYRIPDAFRGKRILVVG 191

  Fly   199 AGPSGMDITNHVRLAAKQVFLS------------------------------------------- 220
            .|.:|.|:...:...|.|||||                                           
  Rat   192 LGNTGGDVAVELSGIAAQVFLSTRTGAWVRSRSSVGGYPLNMMQTRWRNFLAQVLPSRFVSWNQE 256

  Fly   221 -----------HHLSTT-------------PNTAFMGNVTQKPDVKRFTKDGAVFTDGSTE-SFD 260
                       :.||..             |.....|.:|.|..||.||:...||.||:.| :.|
  Rat   257 RQMNKIFNHENYGLSIAKGKKPKFIVNDELPTCILCGKITMKTSVKDFTESSIVFEDGTIEANID 321

  Fly   261 HVMFCTGYKYTFPCLSTDVGVQVIDNFVQPLWKHCI------------NINHPTMAFVGL----P 309
            .|:|.|||:::||.            |.:||...|.            |:...|:|.:||    .
  Rat   322 VVIFTTGYEFSFPF------------FEEPLKSLCTKKVILYKRVFPPNLERSTLAIIGLISLTG 374

  Fly   310 FNVIPTHIFDMQVRFTLKFFTGQRKFPSREQMIADL--EQEIGERWGCGVRNQKKAHQMGERQFV 372
            ..::.|   :.|.|:..:.|.|....|..::::|:.  ::|:.:|   ||.......::   .|:
  Rat   375 SILVGT---EFQARWATRVFKGLCNIPPSQKLMAEAIKKEELIKR---GVIKDTSQDKL---DFI 430

  Fly   373 -YYNELASIAGIENIKPVIHKLMKD 396
             |.:||....|.:...|::  .:||
  Rat   431 SYMDELTQCIGAKPNIPLL--FLKD 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-2NP_610217.1 PLN02172 3..384 CDD:215116 122/466 (26%)
Fmo4NP_653147.2 FMO-like 2..530 CDD:395602 125/480 (26%)

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