DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-2 and Fmo4

DIOPT Version :9

Sequence 1:NP_610217.1 Gene:Fmo-2 / 35561 FlyBaseID:FBgn0033079 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_653147.2 Gene:Fmo4 / 246247 RGDID:628601 Length:560 Species:Rattus norvegicus


Alignment Length:478 Identity:124/478 - (25%)
Similarity:205/478 - (42%) Gaps:117/478 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RRVCVIGAGTAGLCALKNSLEAGLDAVAYERGTEIGGTWIFSEEMPKDEYDEVHSSMYEGLRTNL 73
            ::|.|||||.:||.::|..|:..|:...:||.::.||.|.|:|..     ::..:.:|..|.||:
  Rat     3 KKVAVIGAGVSGLSSIKCCLDENLEPTCFERSSDFGGLWKFAEAS-----EDGMTRVYRSLVTNV 62

  Fly    74 PKEVMGYPDYSYPDDITESFITSNQVLEFLRSYAEHFKLKAHIKLQHEVIRVRPRLDDWEVYVWD 138
            .||:..|.|:.:.:|. .:|::..:..::||.:||||.|..:|:.:..|..|..|.|..|...|:
  Rat    63 CKEMSCYSDFPFHEDY-PNFMSHEKFWDYLREFAEHFGLLKYIRFKTTVRSVTKRPDFSETGQWE 126

  Fly   139 HSTDT---CDPVYYDFVYVCNGHYTEPDLP--EVEGLDLFEGNKMHSHLYRKADKFKDARVLIIG 198
            ..|:|   .|...:|.|.||.|.:..|.||  ...|:..|:|..:||..||..|.|:..|:|::|
  Rat   127 VVTETEGKQDRAVFDAVMVCTGQFLSPRLPLESFPGIHKFKGQILHSQEYRIPDAFRGKRILVVG 191

  Fly   199 AGPSGMDITNHVRLAAKQVFLS------------------------------------------- 220
            .|.:|.|:...:...|.|||||                                           
  Rat   192 LGNTGGDVAVELSGIAAQVFLSTRTGAWVRSRSSVGGYPLNMMQTRWRNFLAQVLPSRFVSWNQE 256

  Fly   221 -----------HHLSTT-------------PNTAFMGNVTQKPDVKRFTKDGAVFTDGSTE-SFD 260
                       :.||..             |.....|.:|.|..||.||:...||.||:.| :.|
  Rat   257 RQMNKIFNHENYGLSIAKGKKPKFIVNDELPTCILCGKITMKTSVKDFTESSIVFEDGTIEANID 321

  Fly   261 HVMFCTGYKYTFPCLSTDVGVQVIDNFVQPLWKHCI------------NINHPTMAFVGLPFNVI 313
            .|:|.|||:::||.            |.:||...|.            |:...|:|.:|| .::.
  Rat   322 VVIFTTGYEFSFPF------------FEEPLKSLCTKKVILYKRVFPPNLERSTLAIIGL-ISLT 373

  Fly   314 PTHIF--DMQVRFTLKFFTGQRKFPSREQMIADL--EQEIGERWGCGVRNQKKAHQMGERQFV-Y 373
            .:.:.  :.|.|:..:.|.|....|..::::|:.  ::|:.:|   ||.......::   .|: |
  Rat   374 GSILVGTEFQARWATRVFKGLCNIPPSQKLMAEAIKKEELIKR---GVIKDTSQDKL---DFISY 432

  Fly   374 YNELASIAGIENIKPVIHKLMKD 396
            .:||....|.:...|::  .:||
  Rat   433 MDELTQCIGAKPNIPLL--FLKD 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-2NP_610217.1 NADB_Rossmann 12..214 CDD:304358 67/206 (33%)
Fmo4NP_653147.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 220 1.000 Inparanoid score I3468
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm9017
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.780

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