DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-2 and Fmo2

DIOPT Version :10

Sequence 1:NP_610217.1 Gene:Fmo-2 / 35561 FlyBaseID:FBgn0033079 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_653338.2 Gene:Fmo2 / 246245 RGDID:628600 Length:535 Species:Rattus norvegicus


Alignment Length:495 Identity:139/495 - (28%)
Similarity:220/495 - (44%) Gaps:119/495 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RRVCVIGAGTAGLCALKNSLEAGLDAVAYERGTEIGGTWIFSEEMPKDEYDEVHSSMYEGLRTNL 73
            ::|.|||||.:||.:||..::.||:...:||..:|||.|.|     |:..::..:|:|..:.||.
  Rat     3 KKVAVIGAGVSGLISLKCCVDEGLEPTCFERTEDIGGLWRF-----KENVEDGRASIYHSVITNT 62

  Fly    74 PKEVMGYPDYSYPDDITESFITSNQVLEFLRSYAEHFKLKAHIKLQHEVIRVRPRLD-----DWE 133
            .||:..:.|:..|:|. .:|:.::::||:.|.:|:.|.|..:|:.|..||.|:.|.|     .|:
  Rat    63 SKEMSCFSDFPMPEDF-PNFLHNSKLLEYFRIFAKKFDLLKYIQFQTTVISVKKRPDFASSGQWD 126

  Fly   134 VYVWDHSTDTCDPVYYDFVYVCNGHYTEPDLP--EVEGLDLFEGNKMHSHLYRKADKFKDARVLI 196
            |||..:..:  ....:|.|.||:||:.:|.||  ...|::.|:|...||..|:....::..|:|:
  Rat   127 VYVQSNGKE--QRAVFDAVMVCSGHHIQPHLPLKSFPGIERFQGQYFHSRQYKHPVGYEGKRILV 189

  Fly   197 IGAGPSGMDITNHVRLAAKQVFLS-HHLS------------------------------------ 224
            :|.|.|..||.:.:...|.|||:| .|.|                                    
  Rat   190 VGIGNSAADIASELSKRAAQVFVSTRHGSWVLSRISEDGYPWDMVFHTRFSSMLRNVLPRTVVKW 254

  Fly   225 --------------------------------TTPNTAFMGNVTQKPDVKRFTKDGAVFTDGST- 256
                                            ..|:....|.:..|..||..|:...||.||:. 
  Rat   255 MMERQMNRWFNHENYGLVPQNKYLMKEPVLNDDLPSRLLYGAIKVKTRVKELTETAVVFEDGTVE 319

  Fly   257 ESFDHVMFCTGYKYTFPCLSTDVGVQVIDNFVQPLWKHCI--NINHPTMAFVGL--PF-NVIPTH 316
            |..|.::|.|||.::||.|. |..|:|.||.|. |:|...  ::..||:|.:||  |. ::.|| 
  Rat   320 EDVDVIVFATGYTFSFPFLE-DSLVKVEDNKVS-LYKAMFPPHLEKPTLACIGLIQPLGSIFPT- 381

  Fly   317 IFDMQVRFTLKFFTGQRKFPSREQMIADLEQEIGERWGCGVRNQKKAHQMGERQ--------FVY 373
             .::|.|:..:.|.|..:.||...|:||:.:          ||:|:....|:.|        ..|
  Rat   382 -VELQARWATRVFKGVCRLPSETTMMADIAE----------RNEKRIDLFGKSQSQILQTNYIDY 435

  Fly   374 YNELASIAGIENIKP-VIHKLMKD---CGKKYIFELDTYR 409
            .:|||...|   .|| .|..|.||   ..|.|....::|:
  Rat   436 LDELALEIG---AKPDFISLLFKDPKLAVKLYFGPCNSYQ 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-2NP_610217.1 PLN02172 3..384 CDD:215116 130/464 (28%)
Fmo2NP_653338.2 FMO-like 3..532 CDD:395602 139/495 (28%)

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