DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fmo-2 and Fmo4

DIOPT Version :9

Sequence 1:NP_610217.1 Gene:Fmo-2 / 35561 FlyBaseID:FBgn0033079 Length:429 Species:Drosophila melanogaster
Sequence 2:XP_006496836.1 Gene:Fmo4 / 226564 MGIID:2429497 Length:581 Species:Mus musculus


Alignment Length:481 Identity:129/481 - (26%)
Similarity:201/481 - (41%) Gaps:123/481 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RRVCVIGAGTAGLCALKNSLEAGLDAVAYERGTEIGGTWIFSEEMPKDEYDEVHSSMYEGLRTNL 73
            ::|.|||||.:||.::|..|:..|:...:||.::.||.|.|:     |..::..:.:|..|.||:
Mouse    24 KKVAVIGAGVSGLSSIKCCLDENLEPTCFERTSDFGGLWKFA-----DTSEDGMTRVYRSLVTNV 83

  Fly    74 PKEVMGYPDYSYPDDITESFITSNQVLEFLRSYAEHFKLKAHIKLQHEVIRVRPRLDDWEVYVWD 138
            .||:..|.|:.:.:|. .:|::..:..::||.:||||.|..:|:.:..|:.|..|.|..|...||
Mouse    84 CKEMSCYSDFPFREDY-PNFMSHEKFWDYLREFAEHFGLLRYIRFKTTVLSVTKRPDFSETGQWD 147

  Fly   139 HSTDT---CDPVYYDFVYVCNGHYTEPDLP--EVEGLDLFEGNKMHSHLYRKADKFKDARVLIIG 198
            ..|:|   .|...:|.|.||.|.:..|.||  ...|:..|:|..:||..||..|.|:..|:|::|
Mouse   148 VVTETEGKRDRAVFDAVMVCTGQFLSPHLPLESFPGIHKFKGQILHSQEYRIPDAFRGKRILVVG 212

  Fly   199 AGPSGMDITNHVRLAAKQVFLSHHLST-------------------------------------- 225
            .|.:|.||...:...|.|||||....|                                      
Mouse   213 LGNTGGDIAVELSEIAAQVFLSTRTGTWVLSRSSPGGYPFNMIQTRWLNFLVRVLPSRFINWTHE 277

  Fly   226 -----------------------------TPNTAFMGNVTQKPDVKRFTKDGAVFTDGSTE-SFD 260
                                         .|.....|.||.|..||.||:...:|.||:|| :.|
Mouse   278 RKMNKILNHENYGLSIAKGKKPKFIVNDELPTCILCGKVTMKTSVKDFTESSVIFEDGTTEANID 342

  Fly   261 HVMFCTGYKYTFPCLSTDVGVQVIDNFVQPLWKHCI------------NINHPTMAFVGL-PFN- 311
            .|:|.|||:::||.            |.:||...|.            |:...|:|.:|| ..| 
Mouse   343 VVIFTTGYEFSFPF------------FEEPLKSLCTKKIILYKRVFPPNLERATLAIIGLISLNG 395

  Fly   312 --VIPTHIFDMQVRFTLKFFTGQRKFPSREQMIAD---LEQEIGERWGCGVRNQKKAHQMGERQF 371
              ::.|   :.|.|:..:.|.|....|..::::|:   .||.|       .|...|.....:..|
Mouse   396 SILVGT---EFQARWATRVFKGLCSIPPSQKLMAEATKTEQLI-------KRGVIKDTSQDKLDF 450

  Fly   372 V-YYNELASIAGIENIKPVIHKLMKD 396
            : |.:||....|.:...|::  .:||
Mouse   451 ITYMDELTQCIGAKPSIPLL--FIKD 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-2NP_610217.1 NADB_Rossmann 12..214 CDD:304358 69/206 (33%)
Fmo4XP_006496836.1 FMO-like 23..552 CDD:109787 129/481 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 206 1.000 Inparanoid score I3710
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm8771
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.780

Return to query results.
Submit another query.