DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-2 and C01H6.4

DIOPT Version :9

Sequence 1:NP_610217.1 Gene:Fmo-2 / 35561 FlyBaseID:FBgn0033079 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_492038.3 Gene:C01H6.4 / 182092 WormBaseID:WBGene00007254 Length:405 Species:Caenorhabditis elegans


Alignment Length:424 Identity:138/424 - (32%)
Similarity:230/424 - (54%) Gaps:37/424 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RRVCVIGAGTAGLCALKNSLEAGLDAVAYERGTEIGGTWIFSEEMPKDEYDEVHSSMYEGLRTNL 73
            :::|:||||.|||.:.|::::.|.....:|:..::||||::||:      ...|||:|:.::|||
 Worm     3 KKICIIGAGAAGLVSAKHAIKQGYQVDIFEQTDQVGGTWVYSEK------TGCHSSLYKVMKTNL 61

  Fly    74 PKEVMGYPDYSYPDDITESFITSNQVLEFLRSYAEHFKLKAHIKLQHEVIRVRPRLDDWEVYVWD 138
            |||.|.:.|..:.|:: .||::...|||:|..:::.|.    |:....|..|:...|.|:|.: :
 Worm    62 PKEAMLFQDEPFRDEL-PSFMSHEHVLEYLNEFSKDFP----IQFSSTVNEVKRENDLWKVLI-E 120

  Fly   139 HSTDTCDPVYYDFVYVCNGHYTEPDLPEVEGLDLFEGNKMHSHLYRKADKFKDARVLIIGAGPSG 203
            .:::|... :||.|:|||||:.||..|...  ..|:|..:|||.||:|:.:....|:|:||||||
 Worm   121 SNSETITR-FYDVVFVCNGHFFEPLNPYQN--SYFKGKLIHSHDYRRAEHYTGKNVVIVGAGPSG 182

  Fly   204 MDITNHVRLAAKQVFLSHHLSTTPNTAFMGNVTQ-KPDVKRFTKDGAVFTDGSTESFDHVMFCTG 267
            :|||..:...|..|.|....:|.|  ....:|.| ..:||...:.|.|..:|.....|.::.|||
 Worm   183 IDITLQIAQTANHVTLISKKATYP--VLPESVQQMATNVKSVDEHGVVTDEGDHVPADVIIVCTG 245

  Fly   268 YKYTFPCL-STDVGVQVIDNFVQPLWKHCININHP-TMAFVGLPFNVIPTHIFDMQVRFTLKFFT 330
            |.:.||.| |:.:.::..|..|.||::|..::::| |:.|:|||...|...:|::||::.|....
 Worm   246 YVFKFPFLDSSLIQLKYNDRMVSPLYEHLCHVDYPTTLFFIGLPLGTITFPLFEVQVKYALSLIA 310

  Fly   331 GQRKFPSREQMIADLEQEIGERWGCGVRNQKKAHQMGERQFVYYNELASIAG------IENIKPV 389
            |:.|.||.:..|.:.|....:    |:.|....|.:.|.|:.|..:||.:.|      :|.||.:
 Worm   311 GKGKLPSDDVEIRNFEDARLQ----GLLNPASFHVIIEEQWEYMKKLAKMGGFEEWNYMETIKKL 371

  Fly   390 IHKLMKDCGKKYI------FELDTYRSNKYTILD 417
            ...:|.:..|..|      |||.| .|:.:.::|
 Worm   372 YGYIMTERKKNVIGYKMVNFELTT-DSSDFKVVD 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-2NP_610217.1 NADB_Rossmann 12..214 CDD:304358 74/201 (37%)
C01H6.4NP_492038.3 NADB_Rossmann 6..205 CDD:304358 77/213 (36%)
MDR <162..>250 CDD:302572 31/89 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162409
Domainoid 1 1.000 161 1.000 Domainoid score I2439
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 215 1.000 Inparanoid score I2330
Isobase 1 0.950 - 0 Normalized mean entropy S2746
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm4765
orthoMCL 1 0.900 - - OOG6_100150
Panther 1 1.100 - - O PTHR43539
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2115
SonicParanoid 1 1.000 - - X69
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.750

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