DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-2 and fmo-4

DIOPT Version :9

Sequence 1:NP_610217.1 Gene:Fmo-2 / 35561 FlyBaseID:FBgn0033079 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001256532.1 Gene:fmo-4 / 179845 WormBaseID:WBGene00001479 Length:568 Species:Caenorhabditis elegans


Alignment Length:490 Identity:124/490 - (25%)
Similarity:204/490 - (41%) Gaps:124/490 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RVCVIGAGTAGLCALKNSLEAGLDAVAYERGTEIGGTWIFSEEMPKDEYDEVHSSMYEGLRTNLP 74
            ||||:|||.:||.|:|..:|.|||.|.:|:..:|||.|.:     :....::..::.|....|..
 Worm     2 RVCVVGAGASGLPAIKACIEEGLDVVCFEKTADIGGLWNY-----RPGQKDIGGTVMESTVVNTS 61

  Fly    75 KEVMGYPDYSYPDDITESFITSNQVLEFLRSYAEHFKLKAHIKLQHEVIRV-RPRLDDWEVYVWD 138
            ||:|.|.|:..|.:.. :|:...:|:|:::||||||.|...|:....|.|: |...:.:.|.:.:
 Worm    62 KEMMAYSDFPPPAEFA-NFMHHTKVIEYIKSYAEHFGLMDKIRFNTPVKRISRNEQNKYIVSLQN 125

  Fly   139 HSTDTCDPVYYDFVYVCNGHYTEPDLPEVEGLDLFEGNKMHSHLYRKADKFKDARVLIIGAGPSG 203
            ...:.     ::.:.:|.||:.||..||::.||.|:|..:|::.|.....::...|.::|.|.|.
 Worm   126 GEIEE-----FEKLILCTGHHAEPSYPELKNLDNFKGKVVHAYDYTNTSGYEGKDVFLLGIGNSA 185

  Fly   204 MDITNHVRLAAKQVFLSHH----------------------------LSTTPNTA---FM----- 232
            :||...:...||.|.:|..                            |.|.|:..   ||     
 Worm   186 LDIAVDIAKIAKSVTISTRRGTWIFNRVSQGGMPYDVQLFSRYYDTLLKTIPHAVANDFMEYRLQ 250

  Fly   233 ---------------------------------GNVTQKPDVKRFTKDGAVFTDGSTESFDHVMF 264
                                             |.:|...|:..||::..:...|.....|..:.
 Worm   251 QRMDHDVYGLRPDHRFFQQHPTVNDALANLLCAGYITITEDIDTFTENSVIVKGGREFKCDIFLT 315

  Fly   265 CTGYKYTFPCLSTDVGVQVIDNFVQPLWKHCININHPTMAFVGL--PFNVIPTHIFDMQVRFTLK 327
            ||||.:.||.:.:|: |: |.|...||:|:....|..::|.:||  |...| ..|.::|.|:..:
 Worm   316 CTGYTFGFPFVDSDI-VE-IKNQQVPLYKYVFPPNSDSVAVIGLIQPIGSI-APISEIQSRWAAR 377

  Fly   328 FFTGQRKFPSREQMIADLEQEIGERWGCGVRNQKKAHQMGERQF------------VYYNELASI 380
            .|.|:.:.||.::.|.|:              |||...|.:|.|            .|.:|:|.|
 Worm   378 VFAGRCQLPSSQEQIDDI--------------QKKKAAMKKRYFDSIKHTIQVDYMSYMDEIAEI 428

  Fly   381 AGIENIKPVIH----------KLMKDCGKKYIFEL 405
            .|.  :.|:.|          ||.......|.:.|
 Worm   429 IGC--LPPMKHYLFFYPRFWMKLFMGANVPYAYRL 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-2NP_610217.1 NADB_Rossmann 12..214 CDD:304358 61/202 (30%)
fmo-4NP_001256532.1 FMO-like 2..488 CDD:109787 124/490 (25%)
NADB_Rossmann 4..209 CDD:304358 65/215 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X69
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.830

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