DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fmo-2 and fmo-3

DIOPT Version :9

Sequence 1:NP_610217.1 Gene:Fmo-2 / 35561 FlyBaseID:FBgn0033079 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_499356.1 Gene:fmo-3 / 176491 WormBaseID:WBGene00001478 Length:512 Species:Caenorhabditis elegans


Alignment Length:515 Identity:121/515 - (23%)
Similarity:220/515 - (42%) Gaps:129/515 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KRRVCVIGAGTAGLCALKNS-LEAGLDAVAYERGTEIGGTWIFSEEMPKDEYDEVHSSMYEGLRT 71
            |:::.|:|||.:||.::::: |...::...:|:..|:||.|.:.      .|....|::.:....
 Worm     5 KKQLLVVGAGASGLPSIRHALLYPNVEVTCFEKTNEVGGLWNYK------PYKTELSTVMKSTVI 63

  Fly    72 NLPKEVMGYPDYSYPDDITESFITSNQVLEFLRSYAEHFKLKAHIKLQHEVIRVRPRLDD----- 131
            |..||:..:.|:. |:|...:|:.:.::..:|.:||:|.:|..:||..:.||.: .|.||     
 Worm    64 NTSKEMTSFSDFP-PEDTMANFMHNTEMCRYLNNYAKHHELLKYIKFNNSVISI-DRNDDYDVTG 126

  Fly   132 -WEVYVWDHSTDTCDPVYYDFVYVCNGHYTEPDLPEV-EGLDLFEGNKMHSHLYRKADKFKDARV 194
             |:|...| .|.......:|.|.:|:||:..|.:|:. .|.:.|:|...|||.|:....::|..|
 Worm   127 KWKVRYSD-ETGAEKTRIFDGVMLCSGHHAIPHIPKPWPGQEKFKGRITHSHDYKDHKGYEDKTV 190

  Fly   195 LIIGAGPSGMDITNHVRLAAKQVFL---------------------------------------- 219
            :::|.|.||.|:...:...:|||:|                                        
 Worm   191 VVVGIGNSGGDLAVELSRISKQVYLVTRRGSWIFNRLFDRGEPLDMCLNSKFQMWLSETIPFPLV 255

  Fly   220 ---------------------SH-----HLSTT---PNTAFMGNVTQKPDVKRFTKDGAVFTDGS 255
                                 :|     |::..   ||....|.|..||.:|.||:....|.||:
 Worm   256 NWNFERLLNMRFDHAKYGLKPNHPAMGAHITVNDELPNRIASGTVRVKPGIKSFTETSIHFEDGT 320

  Fly   256 -TESFDHVMFCTGYKYTFPCLSTDVGVQVIDN------FVQPLWKHCININHPTMAFVGLP---F 310
             .|:.|.|:..||:.:.|..:.....|:|.:|      ::.|:    ...:..|:|.:||.   .
 Worm   321 FVENVDEVILATGFSFHFNLIENGNLVKVDENKTDAFKYMFPM----ATADKNTLAVIGLVQVIG 381

  Fly   311 NVIPTHIFDMQVRFTLKFFTGQRKFPSREQMIADL---EQEIGERWGCGVRNQKKAHQMGERQFV 372
            :::|  |.:||.|..|:.|...|:.||:|:|..::   .|::..|:     .:.:.|.:......
 Worm   382 SIMP--ISEMQARVYLESFAAGRELPSKEEMFHNVIAKRQQMANRY-----VESRRHTIQVDFLP 439

  Fly   373 YYNELASIAGIENIKPVIHKL-MKD-----------CGKKYIFEL---DTYRSNKYTILD 417
            |.:||.::.|   ..|.:..| ||:           | ..|:|.|   :|::..:..|.|
 Worm   440 YLHELGALIG---CNPDMKALWMKNPLLAWRVYFGPC-VPYVFRLNGPNTWQGAEQAIWD 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-2NP_610217.1 NADB_Rossmann 12..214 CDD:304358 58/209 (28%)
fmo-3NP_499356.1 FMO-like 5..495 CDD:109787 120/513 (23%)
NADB_Rossmann 9..223 CDD:304358 62/222 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162417
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2115
SonicParanoid 1 1.000 - - X69
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.690

Return to query results.
Submit another query.