DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-2 and Fmo1

DIOPT Version :10

Sequence 1:NP_610217.1 Gene:Fmo-2 / 35561 FlyBaseID:FBgn0033079 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_034361.1 Gene:Fmo1 / 14261 MGIID:1310002 Length:532 Species:Mus musculus


Alignment Length:479 Identity:126/479 - (26%)
Similarity:206/479 - (43%) Gaps:121/479 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RRVCVIGAGTAGLCALKNSLEAGLDAVAYERGTEIGGTWIFSEEMPKDEYDEVHSSMYEGLRTNL 73
            :||.::|||.:||.::|..||.||:...:||.:::||.|.|:|.:     :|..:|:|:.:.:|.
Mouse     3 KRVAIVGAGVSGLASIKCCLEEGLEPTCFERSSDLGGLWRFTEHV-----EEGRASLYKSVVSNS 62

  Fly    74 PKEVMGYPDYSYPDDITESFITSNQVLEFLRSYAEHFKLKAHIKLQHEVIRVRPRLD-----DWE 133
            .:|:..|||:.:|:|. .:|:.::..||:|:.|:..|.|:..|....:|..:..|.|     .||
Mouse    63 SREMSCYPDFPFPEDY-PNFVPNSLFLEYLKLYSTQFNLQRCIYFNTKVCSITKRPDFAVSGQWE 126

  Fly   134 VYVWDHSTDTCDPVYYDFVYVCNGHYTEPDLP--EVEGLDLFEGNKMHSHLYRKADKFKDARVLI 196
            |....:...  :...:|.|.||.|..|.|.||  ...|:..|:|...||..|:..|.|||.|||:
Mouse   127 VVTVTNGKQ--NSAIFDAVMVCTGFLTNPHLPLDSFPGILTFKGEYFHSRQYKHPDIFKDKRVLV 189

  Fly   197 IGAGPSGMDITNHVRLAAKQVFLS------------------------------HHLSTTPNTAF 231
            :|.|.||.||.......||:||||                              .:|..||..::
Mouse   190 VGMGNSGTDIAVEASHLAKKVFLSTTGGAWVISRVFDSGYPWDMIFMTRFQNMLRNLLPTPIVSW 254

  Fly   232 M---------------------------------------GNVTQKPDVKRFTKDGAVFTD-GST 256
            :                                       |.|..||.:|...::..||.: ...
Mouse   255 LISKKMNSWFNHVNYGVAPEDRTQLREPVLNDELPGRIITGKVFIKPSIKEVKENSVVFNNTPKE 319

  Fly   257 ESFDHVMFCTGYKYTFPCLSTDVGVQVIDNFVQPLWKHCI--NINHPTMAFVGL--PF-NVIPTH 316
            |..|.::|.|||.:.||.|  |..|..:::....|:|:..  ::..||:|.:||  |. :::||.
Mouse   320 EPIDIIVFATGYTFAFPFL--DESVVKVEDGQASLYKYIFPAHLPKPTLAVIGLIKPLGSMVPTG 382

  Fly   317 IFDMQVRFTLKFFTGQRKFPSREQMIADLEQEIGERWGCGVRNQKKAHQMG---------ERQFV 372
              :.|.|:.::...|....|....|:    :|:.||        ||....|         :..::
Mouse   383 --ETQARWVVQVLKGATTLPPPSVMM----EEVNER--------KKNKHSGFGLCYCKALQTDYI 433

  Fly   373 YYNE--LASIAGIENIKPVIHKLM 394
            .|.:  |.||    |.||.:..::
Mouse   434 TYIDDLLTSI----NAKPDLRAML 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-2NP_610217.1 PLN02172 3..384 CDD:215116 123/467 (26%)
Fmo1NP_034361.1 FMO-like 3..531 CDD:395602 126/479 (26%)

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