DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trap1 and htpG

DIOPT Version :10

Sequence 1:NP_477439.2 Gene:Trap1 / 35559 FlyBaseID:FBgn0026761 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_415006.1 Gene:htpG / 945099 ECOCYCID:EG10461 Length:624 Species:Escherichia coli


Alignment Length:640 Identity:227/640 - (35%)
Similarity:371/640 - (57%) Gaps:49/640 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 FQAETRQLLDIVARSLYSDHEVFVRELISNASDALEKFRYTSLSAGGENLAGKDRPLEIRITTDK 132
            ||:|.:|||.::..||||:.|:|:||||||||||.:|.|:.:||  ..:|...|..|.:|::.||
E. coli     9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALS--NPDLYEGDGELRVRVSFDK 71

  Fly   133 PLMQLIIQDTGIGMTKEELVSNLGTIARSGSKKFLEQMKGTQQGASSEASSNIIGQFGVGFYSSF 197
            ....|.|.|.|:|||::|::.:|||||:||:|.|||.:     |:.....|.:||||||||||:|
E. coli    72 DKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESL-----GSDQAKDSQLIGQFGVGFYSAF 131

  Fly   198 IVANKVEVFTRAAVPNAP-GLRWSTDGSGTYEIEEVPDVELGTRIVLHLKTDCREYADEERIKAV 261
            |||:||.|.||||..... |:.|.:.|.|.|.:.::...:.||.|.|||:....|:.|:.|::::
E. coli   132 IVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSI 196

  Fly   262 IKKYSNFVGSPI------------LLNGKQANEIKPLWLLEPQSISKEQHHDFYRFISNSFDVPR 314
            |.|||:.:..|:            :::.::.|:.:.||......|:.|::.:||:.|::.|:.|.
E. coli   197 ISKYSDHIALPVEIEKREEKDGETVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPL 261

  Fly   315 FTLHYNADVPLSIHALLYFPEGKPGLFEM-SRDGNTGVALYTRKVLIQSKTEHLLPKWLRFVKGV 378
            ...|...:......:|||.|...|  ::| :||...|:.||.::|.|....|..:|.:||||:|:
E. coli   262 TWSHNRVEGKQEYTSLLYIPSQAP--WDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGL 324

  Fly   379 VDSEDIPLNLSRELLQNSSLIRKLSSVISTRVIRFLQERSKKQPEEYEAFYRDYGLFLKEGIVTS 443
            :||.|:|||:|||:||:|::.|.|.:.::.||::.|::.:|...|:|:.|::.:||.||||  .:
E. coli   325 IDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEG--PA 387

  Fly   444 SDASEKEEIAKLLRFESSKSETASGRMSLEEYYNAVPAEQQNIYYLAAPNRVLAESSPYYESLKK 508
            .|.:.:|.|||||||.|:.:::::..:|||:|.:.:...|:.|||:.|.:...|:|||:.|.|:|
E. coli   388 EDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRK 452

  Fly   509 RNELVLFCYEPYDELVLMQLGKFKSKKLVSVEKEMREESKETTATTDFGEGSLLRSELDTLIPWL 573
            :...||...:..||.::..|.:|..|...||.|.  :||.|..|  |..:.|...:| ..|.|::
E. coli   453 KGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKV--DESLEKLA--DEVDESAKEAE-KALTPFI 512

  Fly   574 E--EELRGQVIK-VKATTRLDTHPCVIT--VEEMAA--ARHFIRTQSHQVPEQNRFALLQPELEI 631
            :  :.|.|:.:| |:.|.||...|.:::  .:||:.  |:.| .....:|||      ::...|:
E. coli   513 DRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLF-AAAGQKVPE------VKYIFEL 570

  Fly   632 NPKHPIIKKLNKLRESDK--DLAQLIAKQLFANAMVGAGLAEDPRMLLTNMNTLL 684
            ||.|.::|:.....:..|  :..:|:..|..   :...|..|||.:.:..||.||
E. coli   571 NPDHVLVKRAADTEDEAKFSEWVELLLDQAL---LAERGTLEDPNLFIRRMNQLL 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trap1NP_477439.2 HtpG 65..689 CDD:440095 227/640 (35%)
htpGNP_415006.1 PRK05218 4..623 CDD:235366 227/640 (35%)

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