DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trap1 and trap1

DIOPT Version :9

Sequence 1:NP_001260726.1 Gene:Trap1 / 35559 FlyBaseID:FBgn0026761 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001107097.1 Gene:trap1 / 571959 ZFINID:ZDB-GENE-030131-4257 Length:719 Species:Danio rerio


Alignment Length:734 Identity:367/734 - (50%)
Similarity:504/734 - (68%) Gaps:61/734 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VRAMGVLGQACRLGRCAQVLRQS------HRSAPAAFN--ITIGSQ--HSPGALSL--------- 48
            :|::.:|..:..:.:.||:...|      ||..||||.  .|.|.|  |.|....|         
Zfish     2 IRSLNLLKYSLNVSQRAQLRLLSSSKWTGHRIVPAAFTGVDTNGRQQLHQPRPFRLWSPSCSGVS 66

  Fly    49 ---RRYS-----------------TETKQASGSVVDKHEFQAETRQLLDIVARSLYSDHEVFVRE 93
               |.||                 |:|:...|| ..||||||||::|||||||||||:.|||:||
Zfish    67 VHHRSYSTQQHTEPAEEETLHNIITDTENVQGS-FSKHEFQAETKKLLDIVARSLYSEKEVFIRE 130

  Fly    94 LISNASDALEKFRYTSLSAGGENLAGKDRPLEIRITTDKPLMQLIIQDTGIGMTKEELVSNLGTI 158
            ||||.||||||.|:..::|||:.     .|:||.:.||.......|||||:||.||:||||||||
Zfish   131 LISNGSDALEKLRHRMITAGGDT-----APMEIHLQTDSVKGTFTIQDTGVGMNKEDLVSNLGTI 190

  Fly   159 ARSGSKKFLEQMKGTQQGASSEASSNIIGQFGVGFYSSFIVANKVEVFTRAAVPNAPGLRWSTDG 223
            ||||||.||:.::.     .:||||:|||||||||||:|:||:||||::::|..:|||.:||:||
Zfish   191 ARSGSKAFLDALQN-----QAEASSSIIGQFGVGFYSAFMVADKVEVYSQSAEADAPGYKWSSDG 250

  Fly   224 SGTYEIEEVPDVELGTRIVLHLKTDCREYADEERIKAVIKKYSNFVGSPILLNGKQANEIKPLWL 288
            ||.:|:.|...|..||:||||||.||:|::.|:|:|.|:.||||||..||.|||::.|.::.||:
Zfish   251 SGVFEVAEASGVRQGTKIVLHLKDDCKEFSSEDRVKEVVTKYSNFVSFPIFLNGRRLNTLQALWM 315

  Fly   289 LEPQSISKEQHHDFYRFISNSFDVPRFTLHYNADVPLSIHALLYFPEGKPGLFEMSRDGNTGVAL 353
            :||:.||:.||.:|||:::.::|.||:||||.||.||:|.::.|.||.||.:|::||:..:.|||
Zfish   316 MEPKDISEWQHEEFYRYVAQAYDKPRYTLHYRADAPLNIRSIFYVPEMKPSMFDVSREMGSSVAL 380

  Fly   354 YTRKVLIQSKTEHLLPKWLRFVKGVVDSEDIPLNLSRELLQNSSLIRKLSSVISTRVIRFLQERS 418
            |:||:|||:|...:|||||||::||||||||||||||||||.|:|||||..|:..||||||.::|
Zfish   381 YSRKILIQTKATDILPKWLRFLRGVVDSEDIPLNLSRELLQESALIRKLRDVLQQRVIRFLLDQS 445

  Fly   419 KKQPEEYEAFYRDYGLFLKEGIVTSSDASEKEEIAKLLRFESSKSETASGRMSLEEYYNAVPAEQ 483
            ||.||:|..|:.|||||::|||||:.:.|.||:|||||||||| :..|..:.||.||.:.:.|..
Zfish   446 KKDPEKYARFFEDYGLFMREGIVTTGEQSVKEDIAKLLRFESS-ALPAGQQTSLMEYSSRMKAGT 509

  Fly   484 QNIYYLAAPNRVLAESSPYYESLKKRNELVLFCYEPYDELVLMQLGKFKSKKLVSVEKEM----- 543
            :|||||.||||.|||.|||:|::|:::..||||:|.:|||.|:.|.:|..|||:|.|.::     
Zfish   510 RNIYYLCAPNRHLAEHSPYFEAMKQKDMEVLFCFEQFDELTLLHLREFDRKKLISAETDIVVDHY 574

  Fly   544 -REESKETTATTDFGEGSLLRSELDTLIPWLEEELRGQVIKVKATTRLDTHPCVITVEEMAAARH 607
             .|:.:::...::    .|...:.:.|:.|:...|..:|..:|.|.||||||.:|||.||.||||
Zfish   575 KEEKFQDSKPASE----RLSSEQAEDLLAWMRNALVQRVTNIKVTPRLDTHPAMITVLEMGAARH 635

  Fly   608 FIRTQSHQVPEQNRFALLQPELEINPKHPIIKKLNKLRESDKDLAQLIAKQLFANAMVGAGLAED 672
            |:|||......:.|..:|||.||||..|.:||||:.|::|:.:||||:.:|::.|||:.|||.||
Zfish   636 FLRTQQLARSSEERAQILQPTLEINTGHDLIKKLHALKDSNPELAQLLLEQIYDNAMIAAGLNED 700

  Fly   673 PRMLLTNMNTLLSRALEKY 691
            ||.:::.:|.||:|||||:
Zfish   701 PRPMISRLNQLLTRALEKH 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trap1NP_001260726.1 PRK05218 65..689 CDD:235366 340/629 (54%)
HATPase_c 91..246 CDD:280651 87/154 (56%)
HSP90 251..688 CDD:278607 226/442 (51%)
trap1NP_001107097.1 PRK05218 102..717 CDD:235366 340/629 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580779
Domainoid 1 1.000 428 1.000 Domainoid score I583
eggNOG 1 0.900 - - E1_COG0326
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9457
Inparanoid 1 1.050 687 1.000 Inparanoid score I674
OMA 1 1.010 - - QHG53771
OrthoDB 1 1.010 - - D218065at33208
OrthoFinder 1 1.000 - - FOG0006384
OrthoInspector 1 1.000 - - oto40635
orthoMCL 1 0.900 - - OOG6_103348
Panther 1 1.100 - - LDO PTHR11528
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4644
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

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