DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trap1 and Hsp90b1

DIOPT Version :9

Sequence 1:NP_001260726.1 Gene:Trap1 / 35559 FlyBaseID:FBgn0026761 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001012197.2 Gene:Hsp90b1 / 362862 RGDID:1310482 Length:804 Species:Rattus norvegicus


Alignment Length:776 Identity:236/776 - (30%)
Similarity:385/776 - (49%) Gaps:125/776 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VRAMGVLGQACRL---------------GRCAQVLRQSHRSAPAAFNITIGSQHSPGALSLRRYS 52
            :|.:.|||..|.|               |...:.|.:|...:.....:.   |....|:.|...:
  Rat     1 MRVLWVLGLCCVLLTFGFVRADDEVDVDGTVEEDLGKSREGSRTDDEVV---QREEEAIQLDGLN 62

  Fly    53 TETKQASGSVVDKHEFQAETRQLLDIVARSLYSDHEVFVRELISNASDALEKFRYTSLSAGGENL 117
            ....:......:|..||||..:::.::..|||.:.|:|:|||||||||||:|.|..||:  .||.
  Rat    63 ASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLT--DENA 125

  Fly   118 AGKDRPLEIRITTDKPLMQLIIQDTGIGMTKEELVSNLGTIARSGSKKFLEQMKGTQQGASSEAS 182
            ...:..|.::|..|:....|.:.|||:|||:||||.||||||:||:.:||.:|...|:  ..:::
  Rat   126 LAGNEELTVKIKCDREKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQE--DGQST 188

  Fly   183 SNIIGQFGVGFYSSFIVANKVEVFTRAAVPNAPGLRWSTDGSGTYEIEEVPD-----VELGTRIV 242
            |.:||||||||||:|:||:||.|.::.  .|.....|.:|.:   |...:.|     :..||.|.
  Rat   189 SELIGQFGVGFYSAFLVADKVIVTSKH--NNDTQHIWESDSN---EFSVIADPRGNTLGRGTTIT 248

  Fly   243 LHLKTDCREYADEERIKAVIKKYSNFVGSPILL-------------------------------- 275
            |.||.:..:|.:.:.||.:::|||.|:..||.:                                
  Rat   249 LVLKEEASDYLELDTIKNLVRKYSQFINFPIYVWSSKTETVEEPLEEDETAQEEKEEADDEAAVE 313

  Fly   276 ------------------NGKQANEIKPLWLLEPQSISKEQHHDFYRFISNSFDVPRFTLHYNAD 322
                              :.:..|:|||:|....:.:.::::..||:..|...|.|...:|:.|:
  Rat   314 EEEEEKKPKTKKVEKTVWDWELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKESDDPMAYIHFTAE 378

  Fly   323 VPLSIHALLYFPEGKP-GLF-EMSRDGNTGVALYTRKVLIQSKTEHLLPKWLRFVKGVVDSEDIP 385
            ..::..::|:.|...| ||| |.....:..:.||.|:|.|......::||:|.||||||||:|:|
  Rat   379 GEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLP 443

  Fly   386 LNLSRELLQNSSLIRKLSSVISTRVIRFLQERSKK-QPEEY-EAFYRDYGLFLKEGIVTSSDASE 448
            ||:|||.||.    .||..||..:::|...:..|| ..|:| :.|::::|..:|.|::  .|.|.
  Rat   444 LNVSRETLQQ----HKLLKVIRKKLVRKTLDMIKKIADEKYNDTFWKEFGTNIKLGVI--EDHSN 502

  Fly   449 KEEIAKLLRFESSKSETASGRMSLEEYYNAVPAEQQNIYYLAAPNRVLAESSPYYESLKKRNELV 513
            :..:||||||:||...|  ...||::|...:..:|..||::|..:|..|||||:.|.|.|:...|
  Rat   503 RTRLAKLLRFQSSHHST--DITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEV 565

  Fly   514 LFCYEPYDELVLMQLGKFKSKKLVSVEKE-----MREESKETTATTDFGEGSLLRSELDTLIPWL 573
            ::..||.||..:..|.:|..|:..:|.||     ..|:|||:...|:        .|.:.|:.|:
  Rat   566 IYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKSKESREATE--------KEFEPLLNWM 622

  Fly   574 EEE-LRGQVIKVKATTRLDTHPCVITVEEMAAA---RHFIRTQSHQVPEQ---NRFALLQPELEI 631
            ::: |:.::.|...:.||...||.:...:...:   ...::.|::|..:.   |.:|..:...||
  Rat   623 KDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEI 687

  Fly   632 NPKHPIIK-KLNKLRESDKDLAQL-IAKQLFANAMVGAG-LAED--------PRMLLTNMN 681
            ||:||:|: .|.:::|.:.|...: :|..||..|.:.:| |..|        .|||..::|
  Rat   688 NPRHPLIRDMLRRVKEDEDDKTVMDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLN 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trap1NP_001260726.1 PRK05218 65..689 CDD:235366 224/699 (32%)
HATPase_c 91..246 CDD:280651 69/159 (43%)
HSP90 251..688 CDD:278607 143/508 (28%)
Hsp90b1NP_001012197.2 HATPase_Hsp90-like 83..275 CDD:340404 82/200 (41%)
HSP90 257..755 CDD:395131 143/508 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 288..323 0/34 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 749..804 236/776 (30%)
Prevents secretion from ER. /evidence=ECO:0000255 801..804
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0326
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D924636at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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