DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trap1 and Trap1

DIOPT Version :9

Sequence 1:NP_001260726.1 Gene:Trap1 / 35559 FlyBaseID:FBgn0026761 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001034090.1 Gene:Trap1 / 287069 RGDID:1359733 Length:706 Species:Rattus norvegicus


Alignment Length:719 Identity:361/719 - (50%)
Similarity:491/719 - (68%) Gaps:47/719 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VRAMGVLGQACRLGRCAQVLRQSHRSAPA-----------------AFNITIGSQHSPGAL---- 46
            :||:.:.|:..:....|..|....|..|.                 |..|:.|..:|..|.    
  Rat     5 LRALLLWGRGLQSALRAPALAGVRRGKPVLHLQKTTVHFRDPTQSLASGISAGQLYSTQAAEDKK 69

  Fly    47 --SLRRYSTETKQASGSVVDKHEFQAETRQLLDIVARSLYSDHEVFVRELISNASDALEKFRYTS 109
              :|....:.|:...|| |.||||||||::|||||||||||:.|||:|||||||||||||.|:..
  Rat    70 EEALHSIISNTEAVQGS-VSKHEFQAETKKLLDIVARSLYSEKEVFIRELISNASDALEKLRHKR 133

  Fly   110 LSAGGENLAGKDRP-LEIRITTDKPLMQLIIQDTGIGMTKEELVSNLGTIARSGSKKFLEQMKGT 173
            :      ..|:..| :||.:.||.....:.||||||||||||||||||||||||||.|||.::  
  Rat   134 V------CEGQVLPEMEIHLQTDAEKGTITIQDTGIGMTKEELVSNLGTIARSGSKAFLEALQ-- 190

  Fly   174 QQGASSEASSNIIGQFGVGFYSSFIVANKVEVFTRAAVPNAPGLRWSTDGSGTYEIEEVPDVELG 238
               ..:|.||.|||||||||||:|:||:||||::|.|.|.:||.:|.:||||.:||.|...|..|
  Rat   191 ---HQAETSSRIIGQFGVGFYSAFMVADKVEVYSRPAAPESPGYQWLSDGSGVFEIAEASGVRPG 252

  Fly   239 TRIVLHLKTDCREYADEERIKAVIKKYSNFVGSPILLNGKQANEIKPLWLLEPQSISKEQHHDFY 303
            |:|::|||:||:::|:|.|::.|:.||||||..|:.|||::.|.::.:|:::|:.||:.||.:||
  Rat   253 TKIIIHLKSDCKDFANESRVQDVVTKYSNFVSFPLYLNGRRINTLQAIWMMDPKDISEFQHEEFY 317

  Fly   304 RFISNSFDVPRFTLHYNADVPLSIHALLYFPEGKPGLFEMSRDGNTGVALYTRKVLIQSKTEHLL 368
            |:|:.::|.|||.|||..|.||:|.::.|.||.||.:|::||:..:.||||:||||||:|...:|
  Rat   318 RYIAQAYDKPRFILHYKTDAPLNIRSIFYVPEMKPSMFDVSRELGSSVALYSRKVLIQTKATDIL 382

  Fly   369 PKWLRFVKGVVDSEDIPLNLSRELLQNSSLIRKLSSVISTRVIRFLQERSKKQPEEYEAFYRDYG 433
            |||||||:||||||||||||||||||.|:|||||..|:..|:|:|..::|||..|:|..|:.|||
  Rat   383 PKWLRFVRGVVDSEDIPLNLSRELLQESALIRKLRDVLQQRLIKFFIDQSKKDAEKYAKFFEDYG 447

  Fly   434 LFLKEGIVTSSDASEKEEIAKLLRFESSKSETASGRM-SLEEYYNAVPAEQQNIYYLAAPNRVLA 497
            ||::|||||:::...||:||||||:||  |...:|:: ||.:|.:.:.|..:|||||.||||.||
  Rat   448 LFMREGIVTTAEQDIKEDIAKLLRYES--SALPAGQLTSLSDYASRMQAGTRNIYYLCAPNRHLA 510

  Fly   498 ESSPYYESLKKRNELVLFCYEPYDELVLMQLGKFKSKKLVSVEKEM-----REESKETTATTDFG 557
            |.|||||::|::...||||||.:|||.|:.|.:|..|||:|||.::     :||..|.|:..  |
  Rat   511 EHSPYYEAMKQKQTEVLFCYEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDTSPA--G 573

  Fly   558 EGSLLRSELDTLIPWLEEELRGQVIKVKATTRLDTHPCVITVEEMAAARHFIRTQSHQVPEQNRF 622
            | .|...|.:.|:.|:...|..:|..||.|.||||||.::||.||.|||||:|.|.....::.|.
  Rat   574 E-RLSEKETEELMAWMRNALGSRVTNVKVTFRLDTHPAMVTVLEMGAARHFLRMQQLAKTQEERA 637

  Fly   623 ALLQPELEINPKHPIIKKLNKLRESDKDLAQLIAKQLFANAMVGAGLAEDPRMLLTNMNTLLSRA 687
            .||||.|||||:|.:|||||:|||.:.:||||:..|::.|||:.|||.:|||.::..:|.||.:|
  Rat   638 QLLQPTLEINPRHTLIKKLNQLREREPELAQLLVDQIYENAMIAAGLVDDPRAMVGRLNDLLVKA 702

  Fly   688 LEKY 691
            ||::
  Rat   703 LERH 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trap1NP_001260726.1 PRK05218 65..689 CDD:235366 342/630 (54%)
HATPase_c 91..246 CDD:280651 88/155 (57%)
HSP90 251..688 CDD:278607 227/442 (51%)
Trap1NP_001034090.1 PRK05218 89..704 CDD:235366 325/612 (53%)
HATPase_c 114..223 CDD:238030 62/109 (57%)
HSP90 265..703 CDD:278607 226/435 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340911
Domainoid 1 1.000 425 1.000 Domainoid score I593
eggNOG 1 0.900 - - E1_COG0326
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9457
Inparanoid 1 1.050 673 1.000 Inparanoid score I699
OMA 1 1.010 - - QHG53771
OrthoDB 1 1.010 - - D218065at33208
OrthoFinder 1 1.000 - - FOG0006384
OrthoInspector 1 1.000 - - oto97615
orthoMCL 1 0.900 - - OOG6_103348
Panther 1 1.100 - - LDO PTHR11528
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4644
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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