DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trap1 and hsp90

DIOPT Version :10

Sequence 1:NP_477439.2 Gene:Trap1 / 35559 FlyBaseID:FBgn0026761 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_594365.1 Gene:hsp90 / 2543539 PomBaseID:SPAC926.04C Length:704 Species:Schizosaccharomyces pombe


Alignment Length:698 Identity:231/698 - (33%)
Similarity:362/698 - (51%) Gaps:97/698 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SVVDKHEFQAETRQLLDIVARSLYSDHEVFVRELISNASDALEKFRYTSLSAGGENLAGKDRPLE 125
            |..:..:|:||..||:.::..::||:.|:|:|||||||||||:|.||.|||......|.||  |.
pombe     2 SNTETFKFEAEISQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPHALDAEKD--LF 64

  Fly   126 IRITTDKPLMQLIIQDTGIGMTKEELVSNLGTIARSGSKKFLEQMKGTQQGASSEASSNIIGQFG 190
            ||||.||....|.|:||||||||.:|::|||.||:||:|:|:|       .|:|.|..::|||||
pombe    65 IRITPDKENKILSIRDTGIGMTKNDLINNLGVIAKSGTKQFME-------AAASGADISMIGQFG 122

  Fly   191 VGFYSSFIVANKVEVFTRAAVPNAPGLRWSTDGSGTYEI---EEVPDVELGTRIVLHLKTDCREY 252
            |||||:::||:||:|.::.  .:.....|.:...|::.:   .:.|.:..||.|.|.:|.|..:|
pombe   123 VGFYSAYLVADKVQVVSKH--NDDEQYIWESSAGGSFTVTLDTDGPRLLRGTEIRLFMKEDQLQY 185

  Fly   253 ADEERIKAVIKKYSNFVGSPILL------------------------------------------ 275
            .:|:.||..:||:|.|:..||.|                                          
pombe   186 LEEKTIKDTVKKHSEFISYPIQLVVTREVEKEVPEEEETEEVKNEEDDKAPKIEEVDDESEKKEK 250

  Fly   276 ----------NGKQANEIKPLWLLEPQSISKEQHHDFYRFISNSFDVPRFTLHYNADVPLSIHAL 330
                      ..::.|:.||:|...|..::||::..||:.::|.::......|::.:..|...|:
pombe   251 KTKKVKETTTETEELNKTKPIWTRNPSEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFRAI 315

  Fly   331 LYFPEGKP-GLFEMSRDGNTGVALYTRKVLIQSKTEHLLPKWLRFVKGVVDSEDIPLNLSRELLQ 394
            |:.|...| .|||..|..| .:.||.|:|.|....|.|:|:||.|:||||||||:|||||||:||
pombe   316 LFVPRRAPMDLFEAKRKKN-NIKLYVRRVFITDDCEELIPEWLGFIKGVVDSEDLPLNLSREMLQ 379

  Fly   395 NSSLIRKLSSVISTRVIRFLQERSKKQPEEYEAFYRDYGLFLKEGIVTSSDASEKEEIAKLLRFE 459
            .:.:::.:...:..|.:....|.::.: |.::.||..:...||.||  ..||:.:..:|||||:.
pombe   380 QNKIMKVIRKNLVRRCLDMFNEIAEDK-ENFKTFYDAFSKNLKLGI--HEDAANRPALAKLLRYN 441

  Fly   460 SSKSETASGRMSLEEYYNAVPAEQQNIYYLAAPNRVLAESSPYYESLKKRNELVLFCYEPYDELV 524
            |..|  ....:|||:|...:|..|:|||::...::...|:||:.|..:.:...|||..:|.||..
pombe   442 SLNS--PDDLISLEDYITKMPEHQKNIYFITGESKQAVENSPFLEIFRAKKFDVLFMVDPIDEYA 504

  Fly   525 LMQLGKFKSKKLVSVEK---EMREESKETTATTDFGEGSLLRSELDTLIPWLEEELRGQVIKVKA 586
            :.||.:|:.||||::.|   |:.|..:|..|.      ..|..|.:.....|:..|..:|.||..
pombe   505 VTQLKEFEGKKLVNITKDGLELEETDEEKAAR------EKLEKEYEEFAKQLKTILGDKVEKVVV 563

  Fly   587 TTRLDTHPCVITVEE---MAAARHFIRTQSHQVPEQNRFALLQPELEINPKHPIIKKLNKLRE-- 646
            :.::...||::|..:   .|.....::.|:.:....:.:...:...|||||.|||.:|.|..|  
pombe   564 SNKIVGSPCLLTTGQYGWSANMERIMKAQALRDTSMSAYMSSRKTFEINPKSPIIAELKKKVEEN 628

  Fly   647 -----SDKDLAQLIAKQLFANAMVGAGLA-EDPRMLLTNMNTLLSRAL 688
                 |.||||.:    |:..|::.:|.. :||......:|.|:|..|
pombe   629 GAEDRSVKDLATI----LYETALLSSGFTLDDPSAYAQRINRLISLGL 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trap1NP_477439.2 HtpG 65..689 CDD:440095 230/694 (33%)
hsp90NP_594365.1 HSP90 4..704 CDD:481033 230/696 (33%)

Return to query results.
Submit another query.