DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trap1 and hsp-90

DIOPT Version :9

Sequence 1:NP_001260726.1 Gene:Trap1 / 35559 FlyBaseID:FBgn0026761 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_506626.1 Gene:hsp-90 / 179971 WormBaseID:WBGene00000915 Length:702 Species:Caenorhabditis elegans


Alignment Length:680 Identity:221/680 - (32%)
Similarity:366/680 - (53%) Gaps:80/680 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 FQAETRQLLDIVARSLYSDHEVFVRELISNASDALEKFRYTSLSAGGENLAGKDRPLEIRITTDK 132
            ||||..||:.::..:.||:.|:::|||||||||||:|.||.:|:...|...||:  |.|:||.:|
 Worm    10 FQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGKE--LFIKITPNK 72

  Fly   133 PLMQLIIQDTGIGMTKEELVSNLGTIARSGSKKFLEQMKGTQQGASSEASSNIIGQFGVGFYSSF 197
            ....|.|.||||||||.:||:||||||:||:|.|:|.:   |.|    |..::||||||||||:|
 Worm    73 EEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEAL---QAG----ADISMIGQFGVGFYSAF 130

  Fly   198 IVANKVEVFTRAAVPNAPGLRWSTDGSGTYEIEEV--PDVELGTRIVLHLKTDCREYADEERIKA 260
            :||:||.|.::.  .:....:|.:...|::.:...  |:|..||:||:|:|.|..::.:|.:||.
 Worm   131 LVADKVVVTSKN--NDDDSYQWESSAGGSFVVRPFNDPEVTRGTKIVMHIKEDQIDFLEERKIKE 193

  Fly   261 VIKKYSNFVGSPILL------------------------------------------------NG 277
            ::||:|.|:|.||.|                                                ..
 Worm   194 IVKKHSQFIGYPIKLVVEKEREKEVEDEEAVEAKDEEKKEGEVENVADDADKKKTKKIKEKYFED 258

  Fly   278 KQANEIKPLWLLEPQSISKEQHHDFYRFISNSFDVPRFTLHYNADVPLSIHALLYFPEGKP-GLF 341
            ::.|:.||:|...|..||.|::.:||:.:||.::......|::.:..|...|||:.|:..| .||
 Worm   259 EELNKTKPIWTRNPDDISNEEYAEFYKSLSNDWEDHLAVKHFSVEGQLEFRALLFVPQRAPFDLF 323

  Fly   342 EMSRDGNTGVALYTRKVLIQSKTEHLLPKWLRFVKGVVDSEDIPLNLSRELLQNSSLIRKLSSVI 406
            |..:..|: :.||.|:|.|....|.|:|::|.|:||||||||:|||:|||:||.|.:::.:...:
 Worm   324 ENKKSKNS-IKLYVRRVFIMENCEELMPEYLNFIKGVVDSEDLPLNISREMLQQSKILKVIRKNL 387

  Fly   407 STRVIRFLQERSKKQPEEYEAFYRDYGLFLKEGIVTSSDASEKEEIAKLLRFESSKSETASGRMS 471
            ..:.:..:.|.::.: :.::.||..:|..||.||  ..|::.:::::..||:.:|..:..:   |
 Worm   388 VKKCMELIDEVAEDK-DNFKKFYEQFGKNLKLGI--HEDSTNRKKLSDFLRYSTSAGDEPT---S 446

  Fly   472 LEEYYNAVPAEQQNIYYLAAPNRVLAESSPYYESLKKRNELVLFCYEPYDELVLMQLGKFKSKKL 536
            |:||.:.:...|..|||:...::.:..:|.:.|.:|.|...||:..:|.||..:.||.::..|||
 Worm   447 LKEYVSRMKENQTQIYYITGESKDVVAASAFVERVKSRGFEVLYMCDPIDEYCVQQLKEYDGKKL 511

  Fly   537 VSVEKEMREESKETTATTDFGEGSLLRSELDTLIPWLEEELRGQVIKVKATTRLDTHPCVITVEE 601
            |||.||..|..:.......|.|..:....|..:|   ::.|..:|.||..:.||.:.||.|...|
 Worm   512 VSVTKEGLELPETEEEKKKFEEDKVAYENLCKVI---KDILEKKVEKVGVSNRLVSSPCCIVTSE 573

  Fly   602 ---MAAARHFIRTQSHQVPEQNRFALLQPELEINPKHPIIKKLN---KLRESDKDLAQLIAKQLF 660
               .|.....::.|:.:......:...:..|||||.|.|:|.|.   ::.::||.:..|:. .||
 Worm   574 YGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHAIMKTLRDRVEVDKNDKTVKDLVV-LLF 637

  Fly   661 ANAMVGAGLA-EDPRMLLTNMNTLLSRALE 689
            ..|::.:|.: |:|:...:.:..::...|:
 Worm   638 ETALLASGFSLEEPQSHASRIYRMIKLGLD 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trap1NP_001260726.1 PRK05218 65..689 CDD:235366 220/678 (32%)
HATPase_c 91..246 CDD:280651 74/156 (47%)
HSP90 251..688 CDD:278607 135/492 (27%)
hsp-90NP_506626.1 PTZ00272 6..702 CDD:240341 221/680 (33%)
HATPase_c 33..181 CDD:280651 75/158 (47%)
HSP90 184..702 CDD:278607 136/495 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0326
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D924636at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.