DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trap1 and trap1

DIOPT Version :9

Sequence 1:NP_001260726.1 Gene:Trap1 / 35559 FlyBaseID:FBgn0026761 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_002932506.1 Gene:trap1 / 100492593 XenbaseID:XB-GENE-999249 Length:709 Species:Xenopus tropicalis


Alignment Length:724 Identity:354/724 - (48%)
Similarity:488/724 - (67%) Gaps:62/724 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GVLGQACRLGRCAQVLRQSHRSA-------------PAAFNITIGSQHSPGALSL---RRYST-- 53
            |.|.:|.| .||..:..:..||.             ||:.     |:..|.|||.   |||:|  
 Frog     9 GALSRALR-ARCLPLAPKQGRSVSVCISRGAAGTWHPASL-----SRTGPTALSAAAGRRYTTQA 67

  Fly    54 --------------ETKQASGSVVDKHEFQAETRQLLDIVARSLYSDHEVFVRELISNASDALEK 104
                          :|:...|| ..||||||||::|||||||||||:.|||:||||||.||||||
 Frog    68 AENKEEEILHKIISDTENVQGS-ASKHEFQAETKKLLDIVARSLYSEKEVFIRELISNGSDALEK 131

  Fly   105 FRYTSLSAGGENLAGKDRP-LEIRITTDKPLMQLIIQDTGIGMTKEELVSNLGTIARSGSKKFLE 168
            .|:..|:.|..      .| :||.:.||.....|.|||||:|||:::|:||||||||||||.|||
 Frog   132 LRHNHLAQGSA------LPEMEIHLQTDADKGTLTIQDTGVGMTRDDLISNLGTIARSGSKAFLE 190

  Fly   169 QMKGTQQGASSEASSNIIGQFGVGFYSSFIVANKVEVFTRAAVPNAPGLRWSTDGSGTYEIEEVP 233
            .::.     .:::||.|||||||||||:|:||:||.|:::::...:.|..||:||||.:|:.|..
 Frog   191 ALQN-----QADSSSKIIGQFGVGFYSAFMVADKVVVYSQSSEEGSTGYCWSSDGSGVFELVEAS 250

  Fly   234 DVELGTRIVLHLKTDCREYADEERIKAVIKKYSNFVGSPILLNGKQANEIKPLWLLEPQSISKEQ 298
            .|..||::|:|||.||:|:|:|:|:|.|:.||||||..|:.||||:.|.::.||:::|:.|.:.|
 Frog   251 GVRPGTKVVIHLKDDCKEFANEDRVKEVVTKYSNFVSFPLYLNGKRMNTLQALWMMDPKEIGEWQ 315

  Fly   299 HHDFYRFISNSFDVPRFTLHYNADVPLSIHALLYFPEGKPGLFEMSRDGNTGVALYTRKVLIQSK 363
            |.:|||||:.::|.||:.|||.||.||:|.::.|.||.||.:|::||:..:.||||:||||||:|
 Frog   316 HEEFYRFIAQAYDKPRYMLHYKADAPLNIRSIFYVPEMKPSMFDVSREMGSSVALYSRKVLIQTK 380

  Fly   364 TEHLLPKWLRFVKGVVDSEDIPLNLSRELLQNSSLIRKLSSVISTRVIRFLQERSKKQPEEYEAF 428
            ...:|||||||::||||||||||||||||||.|.|||||..|:..|:|:|..::|||.||:|..|
 Frog   381 AADILPKWLRFLRGVVDSEDIPLNLSRELLQESVLIRKLRDVLQRRLIKFFIDQSKKDPEKYAKF 445

  Fly   429 YRDYGLFLKEGIVTSSDASEKEEIAKLLRFESSKSETASGRMSLEEYYNAVPAEQQNIYYLAAPN 493
            :.|||||::|||||:::...||:|||||||||| |.....:.||.||.:.:....:|||||.|||
 Frog   446 FEDYGLFMREGIVTTAEQEVKEDIAKLLRFESS-SLPEGQQTSLTEYASRMQPGTRNIYYLCAPN 509

  Fly   494 RVLAESSPYYESLKKRNELVLFCYEPYDELVLMQLGKFKSKKLVSVEKEM------REESKETTA 552
            |.|||.|||||::||:...||||||.:|||.::.|.:|..|||:|||.::      .::.:|:..
 Frog   510 RHLAEHSPYYEAMKKKQTEVLFCYEQFDELTMLHLREFDKKKLISVETDIVVDHYKEDKFEESIP 574

  Fly   553 TTDFGEGSLLRSELDTLIPWLEEELRGQVIKVKATTRLDTHPCVITVEEMAAARHFIRTQSHQVP 617
            .::    .|...|.:.|:.|:...|..::..||.|.||||||.:|||.||.|||||:|||.....
 Frog   575 ASE----RLSEKEAEDLMAWMRNGLGTRITNVKVTPRLDTHPAMITVLEMGAARHFLRTQQLAKT 635

  Fly   618 EQNRFALLQPELEINPKHPIIKKLNKLRESDKDLAQLIAKQLFANAMVGAGLAEDPRMLLTNMNT 682
            .:.|..:|||.||||..||:||||.:|::.:::||:|:..|::.|||:.|||.||||.::..:|.
 Frog   636 SEERAQILQPTLEINTGHPLIKKLWQLKDGEQELAKLLLDQIYENAMIAAGLNEDPRPMIGRLNE 700

  Fly   683 LLSRALEKY 691
            ||::||||:
 Frog   701 LLAKALEKH 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trap1NP_001260726.1 PRK05218 65..689 CDD:235366 329/630 (52%)
HATPase_c 91..246 CDD:280651 78/155 (50%)
HSP90 251..688 CDD:278607 224/442 (51%)
trap1XP_002932506.1 PRK05218 92..707 CDD:235366 329/630 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 418 1.000 Domainoid score I642
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H9457
Inparanoid 1 1.050 661 1.000 Inparanoid score I762
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D218065at33208
OrthoFinder 1 1.000 - - FOG0006384
OrthoInspector 1 1.000 - - oto104301
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4644
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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