DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jing and GLI1

DIOPT Version :10

Sequence 1:NP_001097200.1 Gene:jing / 35555 FlyBaseID:FBgn0086655 Length:1744 Species:Drosophila melanogaster
Sequence 2:NP_005260.1 Gene:GLI1 / 2735 HGNCID:4317 Length:1106 Species:Homo sapiens


Alignment Length:603 Identity:120/603 - (19%)
Similarity:189/603 - (31%) Gaps:221/603 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1161 PAPSP-SPSASPSGL-GSPSPAASNLSASSRRAASQTDMLSELVTSSCISSGGDDCSQATDSP-- 1221
            |.||. :||....|| |.|....:||.:.........:      |:||           |:.|  
Human    21 PLPSQGAPSVGTEGLSGPPFCHQANLMSGPHSYGPARE------TNSC-----------TEGPLF 68

  Fly  1222 --PMPALPLAKS--------EDATTPISTVSGGSSSGSSNYDEEDDKSVASLETHQTHKRLRDLP 1276
              |..|:.|.|.        .||:..:.||...|.|          ..||.:.:..|        
Human    69 SSPRSAVKLTKKRALSISPLSDASLDLQTVIRTSPS----------SLVAFINSRCT-------- 115

  Fly  1277 TPESGIGGSLSNSESSNSIADAISSKSASVGPPTTAASSASSSASDSNSLASNAPS----PASPE 1337
            :|    |||..:.        :|.:.|.|:|.|           :..|.....:||    |..|.
Human   116 SP----GGSYGHL--------SIGTMSPSLGFP-----------AQMNHQKGPSPSFGVQPCGPH 157

  Fly  1338 DC----------SAAPSPACSASTTGSIPPSTVVDIAMVEATSKSLPKSAISPILSQPKT--IRF 1390
            |.          |..|.|.|...:          ::.|:....:..|   :...:|.|.:  |:.
Human   158 DSARGGMIPHPQSRGPFPTCQLKS----------ELDMLVGKCREEP---LEGDMSSPNSTGIQD 209

  Fly  1391 PAGAGASGKGG-----KR-----HDGVCYWDKCNKKHESNSKLLDHMQTHHVNTQTGPFACLWVG 1445
            |......|:..     ||     ::..|.||.|:::.:|..:|:.|:.:.|::.:...|.|.|.|
Human   210 PLLGMLDGREDLEREEKREPESVYETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG 274

  Fly  1446 CKVYNKESCSRRWLERHVLSHGGSKQFKCIVEGCGLRFGSQLALQKHVNNH-------------- 1496
            |....:...::..|..|:..|.|.|..||..|||...:.....|:.|:.:|              
Human   275 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCS 339

  Fly  1497 ---FNATDNARESTSKRTSDPPV-------------PKQLRKNGKKL---------RYRRQPFSA 1536
               .||:|.|:......:::.|.             |..|||:.|.:         |:|.     
Human   340 KAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRG----- 399

  Fly  1537 RMFDFFDTGIMEGLQHRLRQISTLTNGAQAIEFQGQCMMRRRNSQGGYECFVRWSPREIISDEWL 1601
                       :|...|...|||:.              .:|..:||        |....|...:
Human   400 -----------DGPLPRAPSISTVE--------------PKREREGG--------PIREESRLTV 431

  Fly  1602 PECLNRTRQHTKVLHIKQMRPAEKTRVDSLLSTAFRLRYDSHLFADDYNVNEQQVGEASGSD--C 1664
            ||              ..|:|.......|..|:                 :....|.|:.:|  .
Human   432 PE--------------GAMKPQPSPGAQSSCSS-----------------DHSPAGSAANTDSGV 465

  Fly  1665 DEDGDGDQEEEDLEDQDE 1682
            :..|:.....|||...||
Human   466 EMTGNAGGSTEDLSSLDE 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jingNP_001097200.1 C2H2 Zn finger 1411..1430 CDD:275368 5/18 (28%)
C2H2 Zn finger 1441..1466 CDD:275368 6/24 (25%)
C2H2 Zn finger 1474..1496 CDD:275368 6/21 (29%)
GLI1NP_005260.1 Interaction with SUFU. /evidence=ECO:0000269|PubMed:24217340, ECO:0000269|PubMed:24311597 120..124 1/3 (33%)
FOXP-CC 237..>265 CDD:465036 8/27 (30%)
Interaction with DNA. /evidence=ECO:0000269|PubMed:8378770 283..291 1/7 (14%)
SFP1 <297..387 CDD:227516 20/89 (22%)
C2H2 Zn finger 303..325 CDD:275368 6/21 (29%)
C2H2 Zn finger 333..356 CDD:275368 4/22 (18%)
Interaction with DNA. /evidence=ECO:0000269|PubMed:8378770 345..350 2/4 (50%)
C2H2 Zn finger 364..385 CDD:275368 4/20 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..485 32/178 (18%)
Interaction with DNA. /evidence=ECO:0000269|PubMed:8378770 375..381 2/5 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 516..580
PHA03247 <562..1081 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 732..792
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 817..889
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 914..942
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1054..1087
SNAG domain. /evidence=ECO:0000250 1..20
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.