DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pld and PGS1

DIOPT Version :9

Sequence 1:NP_001137610.1 Gene:Pld / 35554 FlyBaseID:FBgn0286511 Length:1364 Species:Drosophila melanogaster
Sequence 2:XP_011523789.1 Gene:PGS1 / 9489 HGNCID:30029 Length:646 Species:Homo sapiens


Alignment Length:525 Identity:101/525 - (19%)
Similarity:167/525 - (31%) Gaps:202/525 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 EIPFTSIYGPSVKFNSFQRKVFIPGREIHVRIVDTERS---VTTHLLNPNLYTIELTHGP----- 262
            |..:..:..|..:....||.:|:             ||   :...||:|.:  .::|..|     
Human   115 EAVYIMVSAPGCECRRVQRGLFL-------------RSPWLLLAPLLSPAV--PQVTSPPCCLCP 164

  Fly   263 -----FKWTIKRRYKHF--NSLHQQL-----SFFRTSLNIPFPSRSHKEKRTTLKAT-------- 307
                 |:| |:.....|  :|.|.::     .||..     ...:....||..:.|:        
Human   165 EGVHRFQW-IRNLVPEFGVSSSHVRVLSSPAEFFEL-----MKGQIRVAKRRVVMASLYLGTGPL 223

  Fly   308 AREMAD--ESTLK-----DLPSHTKVKQTSTPLRAEGRSSKIAGSNANNAMAMISPNHSSILAGL 365
            .:|:.|  ||||:     ..||:.||                                 |||...
Human   224 EQELVDCLESTLEKSLQAKFPSNLKV---------------------------------SILLDF 255

  Fly   366 TPRRIQKKRKKKKKRKLP---RFPNRPESLVTVENLSVRIKQLE-DYLYNLLNISLYRSHHETLN 426
            |  |..:.||..:...||   |||.:           ||:.... .:|..||.:.:....:||:.
Human   256 T--RGSRGRKNSRTMLLPLLRRFPEQ-----------VRVSLFHTPHLRGLLRLLIPERFNETIG 307

  Fly   427 FVEVSNVSFVPGMGIKGKEGVILKRTGSTRPGQAGCNFFGCFQKNCCVRCNYFCSDVVCGTWRNR 491
            ...:....|        ...|||          :|.|.                ||......::|
Human   308 LQHIKVYLF--------DNSVIL----------SGANL----------------SDSYFTNRQDR 338

  Fly   492 WFFVKETC--FGYIRPTDGSIRAVILFDQGFDVSTGIYQTGMRKGLQVLTNNRHIVLKCWTRRKC 554
            :.|:::..  ..:......::..|.|..||.|.            :||:....| ..|......|
Human   339 YVFLQDCAEIADFFTELVDAVGDVSLQLQGDDT------------VQVVDGMVH-PYKGDRAEYC 390

  Fly   555 KEWMQYLKNTANS--------YARDFTLPNPHMSFAPMRANTHATWYVDGAQYMSAVADGLEAAL 611
            |...:.:.:..||        :|:.|            .:|:..|      |..:|.|.....| 
Human   391 KAANKRVMDVINSARTRQQMLHAQTF------------HSNSLLT------QEDAAAAGDRRPA- 436

  Fly   612 EEIYIADWWLSPEIYMKRPALDGDYWRLDKI----LLRKAEQGVRVFV------LLYKEVEMALG 666
                 .|.|:.|.|.||...:     ::|:|    ||.:||:|.:|::      |....:::.||
Human   437 -----PDTWIYPLIQMKPFEI-----QIDEIVTETLLTEAERGAKVYLTTGYFNLTQAYMDLVLG 491

  Fly   667 INSYY 671
            ..:.|
Human   492 TRAEY 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PldNP_001137610.1 PX_PLD 230..431 CDD:132805 47/239 (20%)
PH_PLD 419..564 CDD:269956 23/146 (16%)
PLDc_vPLD1_2_yPLD_like_1 590..734 CDD:197236 23/92 (25%)
PLDc_vPLD1_2_yPLD_like_2 1032..1220 CDD:197239
PGS1XP_011523789.1 PLDc_PGS1_euk_1 186..359 CDD:197233 45/257 (18%)
PLDc_2 203..355 CDD:289836 42/231 (18%)
PLDc_PGS1_euk_2 439..598 CDD:197235 17/63 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1502
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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