DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pld and PLDP1

DIOPT Version :9

Sequence 1:NP_001137610.1 Gene:Pld / 35554 FlyBaseID:FBgn0286511 Length:1364 Species:Drosophila melanogaster
Sequence 2:NP_001326709.1 Gene:PLDP1 / 820932 AraportID:AT3G16785 Length:1139 Species:Arabidopsis thaliana


Alignment Length:1326 Identity:353/1326 - (26%)
Similarity:509/1326 - (38%) Gaps:491/1326 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 LNPNL--YTIELTHGPFKWTIKRRYKHFNSLHQQLSFFRTSLNIPFPSRSHKEKRTTLKATAREM 311
            ::|.|  ||||..:..|||.:.::......||..|.      ...|....| ||:..:|...:.:
plant    65 ISPVLLSYTIECQYKQFKWQLVKKASQVFYLHFALK------KRAFIEEIH-EKQEQVKEWLQNL 122

  Fly   312 ADESTLKDLPSHTKVKQ----TSTPLRAEGRSSKIAGSNANNAMAMISPNHSSILAGLTPRRIQK 372
            .       :..|..|.|    ...||. :..|:|.....::.|:.:|.|                
plant   123 G-------IGDHPPVVQDEDADEVPLH-QDESAKNRDVPSSAALPVIRP---------------- 163

  Fly   373 KRKKKKKRKLPRFPNRPESLVTVENLSVRIKQ-LEDYLYNLL-NISLYRSHHETLNFVEVSNVSF 435
                               |...:::|||.|. :::||.:.| |:.:..| .|...|:|||.:||
plant   164 -------------------LGRQQSISVRGKHAMQEYLNHFLGNLDIVNS-REVCRFLEVSMLSF 208

  Fly   436 VPGMGIKGKEGVIL-------KRTGSTRPGQAGCNFFGCFQKNCCVRCNYFCSDVVCGTWRNRWF 493
            .|..|.|.||..|:       .::........||.:|      ||      |:|    .|:..|.
plant   209 SPEYGPKLKEDYIMVKHLPKFSKSDDDSNRCCGCCWF------CC------CND----NWQKVWG 257

  Fly   494 FVKETCFGYIR----PTDGSIRAVILFD--------QGFDVSTGIY---QTGMRKGLQVLTNNRH 543
            .:|.   |::.    |.|..:..:|:||        .|.|:|..:.   ...:|...:|.:.||.
plant   258 VLKP---GFLALLEDPFDAKLLDIIVFDVLPVSNGNDGVDISLAVELKDHNPLRHAFKVTSGNRS 319

  Fly   544 IVLKCWTRRKCKEWMQYLKNTANSYARDFTLPNPHMSFAPMRANT----HATWYVDGAQYMSAVA 604
            |.::.....|.|:|:..:.:.|......:..|:...|:||.|..|    .|.|:|||....:|:|
plant   320 IRIRAKNSAKVKDWVASINDAALRPPEGWCHPHRFGSYAPPRGLTDDGSQAQWFVDGGAAFAAIA 384

  Fly   605 DGLEAALEEIYIADWWLSPEIYMKRPALDGDYWRLDKILLRKAEQGVRVFVLLYKEVEMALGINS 669
            ..:|.|..||:|..||:.||:|::||.......|||.:|..||:|||::::|:||||.:||.|||
plant   385 AAIENAKSEIFICGWWVCPELYLRRPFDPHTSSRLDNLLENKAKQGVQIYILIYKEVALALKINS 449

  Fly   670 YYSK-STLAKHENIKVMRHPDHARGGILLWAHHEKIVVIDQTYAFMGGIDLCYGRWDDHHHRLTD 733
            .||| ..|..|||::|:|:|||...|:.||:||||:|::|....|:||:|||:||:|...|::.|
plant   450 VYSKRRLLGIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDNQVCFIGGLDLCFGRYDTFEHKVGD 514

  Fly   734 LGSISTSSFSGSTRRTPSLYFTKDDTDSAFGSRKSSRNAHYDTSAKERPPSPPPDEPNTSIELKT 798
                           .||:.:...|              :|         :|...||||      
plant   515 ---------------NPSVTWPGKD--------------YY---------NPRESEPNT------ 535

  Fly   799 LKPGDRLLIPSTLVSSPGETPAESGIALEGMKLNTPEMERKNVLDRLKNNAMKGARMGKDFMHRL 863
                                                           ..:|:|            
plant   536 -----------------------------------------------WEDALK------------ 541

  Fly   864 TATETEEKSAEVYTIESEEATDHEVNLNMASGGQEVAITTSSTQILSEFCGQAKYWFGKDYSNFI 928
                                                                             
plant   542 ----------------------------------------------------------------- 541

  Fly   929 LKDWMNLNSPFVDIIDRTTTPRMPWHDVGLCVVGTSARDVARHFIQRWNAMKLEKLRDNTRFPYL 993
                        |.::|...||||||||...:.|...|||||||:||||..|..|.......|.|
plant   542 ------------DELERKKHPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPYEDSIPLL 594

  Fly   994 MPK-------------------------------------------------------------- 996
            ||:                                                              
plant   595 MPQHHMVIPHYMGRQEESDIESKKEEDSIRGIRRDDSFSSRSSLQDIPLLLPHEPVDQDGSSGGH 659

  Fly   997 ------------SYHQVRLNP----------------------------------NIQQNRQQ-- 1013
                        |:.:.::.|                                  ..|.:..|  
plant   660 KENGTNNRNGPFSFRKSKIEPVDGDTPMRGFVDDRNGLDLPVAKRGSNAIDSEWWETQDHDYQVG 724

  Fly  1014 ------------RVTCQLLRSVSAWSCGFIEADLVEQSIHDAYIQTITKAQHYVYIENQFFITMQ 1066
                        ...||::||||.||.|   ...||:|||.||...|.||:|::||||||||:  
plant   725 SPDETGQVGPRTSCRCQIIRSVSQWSAG---TSQVEESIHSAYRSLIDKAEHFIYIENQFFIS-- 784

  Fly  1067 LGMGVPGAYNNVRNQIGETLFKRIVRAHKERKPFRVYVIMPLLPGFEGDVGGSTGIAVRAITHWN 1131
               |:.|. :.|:|::.|.|:|||:|||.|:|.|||.|::||||||:|.:..|...:||||.||.
plant   785 ---GLSGD-DTVKNRVLEALYKRILRAHNEKKIFRVVVVIPLLPGFQGGIDDSGAASVRAIMHWQ 845

  Fly  1132 YASISRGRTSILTRLQEAGIANPENYISFHSLRNHSFLN-NTPI-TELIYVHSKLLIADDRVVIC 1194
            |.:|.||..||||.|.........:||||:.||.:..|: :.|: |..:|||||::|.|||..:.
plant   846 YRTIYRGHNSILTNLYNTIGVKAHDYISFYGLRAYGKLSEDGPVATSQVYVHSKIMIVDDRAALI 910

  Fly  1195 GSANINDRSMIGKRDSEIAAILMDEEFEDGRMNGKKYPSGVFAGRLRKYLFKEHLGLLESEGSSR 1259
            |||||||||::|.|||||..::.|.|..|.||.||.:.:|.|:..||..|:.|||||...|    
plant   911 GSANINDRSLLGSRDSEIGVLIEDTELVDSRMAGKPWKAGKFSSSLRLSLWSEHLGLRTGE---- 971

  Fly  1260 SDLD-INDPVCEKFWHGTWRRISMQNTEIYDEVFKCIPTD------------------------- 1298
              :| |.|||.:..:...|...:..||.||.:||.|:|.|                         
plant   972 --IDQIIDPVSDSTYKEIWMATAKTNTMIYQDVFSCVPNDLIHSRYNSGLSFLSSPLATIIIPFE 1034

  Fly  1299 -------------FVKTFASLRK--------YQEEPPLAKTAPDLA------------------- 1323
                         .||:...:|:        |.:| .|..|..||.                   
plant  1035 TKRFRIMINPWHWIVKSLEYIRRMAFRQSLSYWKE-KLGHTTIDLGIAPEKLESYHNGDIKRSDP 1098

  Fly  1324 ANRANDIQGYLVDLPLEFLNKEVLTP 1349
            .:|...|:|:||..||:|:.||.|.|
plant  1099 MDRLKAIKGHLVSFPLDFMCKEDLRP 1124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PldNP_001137610.1 PX_PLD 230..431 CDD:132805 40/189 (21%)
PH_PLD 419..564 CDD:269956 41/166 (25%)
PLDc_vPLD1_2_yPLD_like_1 590..734 CDD:197236 69/144 (48%)
PLDc_vPLD1_2_yPLD_like_2 1032..1220 CDD:197239 94/189 (50%)
PLDP1NP_001326709.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 168 1.000 Domainoid score I1180
eggNOG 1 0.900 - - E1_COG1502
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 533 1.000 Inparanoid score I276
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D755722at2759
OrthoFinder 1 1.000 - - FOG0001475
OrthoInspector 1 1.000 - - otm3161
orthoMCL 1 0.900 - - OOG6_100567
Panther 1 1.100 - - LDO PTHR18896
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1041
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.920

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