DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pld and PLDP2

DIOPT Version :9

Sequence 1:NP_001137610.1 Gene:Pld / 35554 FlyBaseID:FBgn0286511 Length:1364 Species:Drosophila melanogaster
Sequence 2:NP_187214.2 Gene:PLDP2 / 819730 AraportID:AT3G05630 Length:1046 Species:Arabidopsis thaliana


Alignment Length:1269 Identity:358/1269 - (28%)
Similarity:518/1269 - (40%) Gaps:442/1269 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 IVDTERSVTTHLLNPNL--YTIELTHGPFKWTIKRR-----YKHF--------NSLH---QQLSF 283
            ||...|..||. .:|.|  ||:||.:..||||::::     |.||        ..||   :|:..
plant    49 IVSVSRPDTTD-FSPLLLSYTLELQYKQFKWTLQKKASQVLYLHFALKKRLIIEELHDKQEQVRE 112

  Fly   284 FRTSLNIPFPSRSHKEKRTTLKATAREMADESTLKDLPSH---TKVKQTSTPLRAEGRSSKIAGS 345
            :..||.|           ..::.:..:..:|.....||.|   ..:|..:.|.||          
plant   113 WLHSLGI-----------FDMQGSVVQDDEEPDDGALPLHYTEDSIKNRNVPSRA---------- 156

  Fly   346 NANNAMAMISPNHSSILAGLTPRRIQKKRKKKKKRKLPRFPNRPESLVTVENLSVRIKQLEDYLY 410
                |:.:|.|.                            ..|.|::|.....:     ::.||.
plant   157 ----ALPIIRPT----------------------------IGRSETVVDRGRTA-----MQGYLS 184

  Fly   411 NLL-NISLYRSHHETLNFVEVSNVSFVPGMGIKGKEGVILKRTGSTRPGQAGCNFFGCFQKNCCV 474
            ..| |:.:..| .|...|:|||.:||....|.|.|||.:..:.....||..|            |
plant   185 LFLGNLDIVNS-KEVCKFLEVSRLSFAREYGSKMKEGYVTVKHLRDVPGSDG------------V 236

  Fly   475 RCNYFCSDVVC----GT-WRNRWFFVKETCFGYIR----PTDGSIRAVILFDQGFDVSTGIYQT- 529
            ||   |....|    || |...|..:|.   |::.    |..|.:..:::||     :.|:..| 
plant   237 RC---CLPTHCLGFFGTSWTKVWAVLKP---GFLALLEDPFSGKLLDIMVFD-----TLGLQGTK 290

  Fly   530 ----------------GMRKGLQVLTNNRHIVLKCWTRRKCKEWMQYLKNTANSYARDFTLPNPH 578
                            .:|.|.:|.:.:|.:.|:..:.||.|||::.: :.|..|       :||
plant   291 ESSEQPRLAEQVKEHNPLRFGFKVTSGDRTVRLRTTSSRKVKEWVKAV-DEAGCY-------SPH 347

  Fly   579 M--SFAPMRANT----HATWYVDGAQYMSAVADGLEAALEEIYIADWWLSPEIYMKRPALDGDYW 637
            .  ||||.|..|    .|.|:|||.....|:|..::.|..||::..|||.||:|:|||..|....
plant   348 RFGSFAPPRGLTSDGSQAQWFVDGHTAFEAIAFAIQNATSEIFMTGWWLCPELYLKRPFEDHPSL 412

  Fly   638 RLDKILLRKAEQGVRVFVLLYKEVEMALGINSYYSKSTLAK-HENIKVMRHPDHARGGILLWAHH 701
            |||.:|..||:|||::::||||||::||.|||.|||..|.. |:|:||:|:|||...||.||:||
plant   413 RLDALLETKAKQGVKIYILLYKEVQIALKINSLYSKKRLQNIHKNVKVLRYPDHLSSGIYLWSHH 477

  Fly   702 EKIVVIDQTYAFMGGIDLCYGRWDDHHHRLTDLGSISTSSFSGSTRRTPSLYFTKDDTDSAFGSR 766
            ||||::|....|:||:|||:||:|...|::.|.              .|.::..||         
plant   478 EKIVIVDYQVCFIGGLDLCFGRYDTAEHKIGDC--------------PPYIWPGKD--------- 519

  Fly   767 KSSRNAHYDTSAKERPPSPPPDEPNTSIELKTLKPGDRLLIPSTLVSSPGETPAESGIALEGMKL 831
                  :|         :|...|||:..|  |:|                               
plant   520 ------YY---------NPRESEPNSWEE--TMK------------------------------- 536

  Fly   832 NTPEMERKNVLDRLKNNAMKGARMGKDFMHRLTATETEEKSAEVYTIESEEATDHEVNLNMASGG 896
                                                                             
plant   537 ----------------------------------------------------------------- 536

  Fly   897 QEVAITTSSTQILSEFCGQAKYWFGKDYSNFILKDWMNLNSPFVDIIDRTTTPRMPWHDVGLCVV 961
                                                        |.:||...||||||||...:.
plant   537 --------------------------------------------DELDRRKYPRMPWHDVHCALW 557

  Fly   962 GTSARDVARHFIQRWNAMKLEKLRDNTRFPYLMPKSYHQV------------------------- 1001
            |...|||||||:||||..|..|..:....|.||| .:|.|                         
plant   558 GPPCRDVARHFVQRWNHSKRNKAPNEQTIPLLMP-HHHMVLPHYLGTREIDIIAAAKPEEDPDKP 621

  Fly  1002 ------------------------------------RLNPNIQQN-------------------- 1010
                                                :|:...:|:                    
plant   622 VVLARHDSFSSASPPQEIPLLLPQETDADFAGRGDLKLDSGARQDPGETSEESDLDEAVNDWWWQ 686

  Fly  1011 --RQQRVTCQLLRSVSAWSCGFIEADLVEQSIHDAYIQTITKAQHYVYIENQFFITMQLGMGVPG 1073
              :|....||::||||.||.|..:.   |.|||.||...|..|:|::||||||||:   |:   .
plant   687 IGKQSDCRCQIIRSVSQWSAGTSQP---EDSIHRAYCSLIQNAEHFIYIENQFFIS---GL---E 742

  Fly  1074 AYNNVRNQIGETLFKRIVRAHKERKPFRVYVIMPLLPGFEGDVGGSTGIAVRAITHWNYASISRG 1138
            ..:.:.|::.|.|::||::||:|.|.|||.:::||||||:|.:.......|||:.||.|.:|||.
plant   743 KEDTILNRVLEALYRRILKAHEENKCFRVVIVIPLLPGFQGGIDDFGAATVRALMHWQYRTISRE 807

  Fly  1139 RTSILTRLQEAGIANPENYISFHSLRNHSFL-NNTPI-TELIYVHSKLLIADDRVVICGSANIND 1201
            .||||..|........::||||:.||::..| .:.|| |..|||||||:|.|||:.:.||:||||
plant   808 GTSILDNLNALLGPKTQDYISFYGLRSYGRLFEDGPIATSQIYVHSKLMIVDDRIAVIGSSNIND 872

  Fly  1202 RSMIGKRDSEIAAILMDEEFEDGRMNGKKYPSGVFAGRLRKYLFKEHLGLLESEGSSRSDLDIND 1266
            ||::|.|||||..::.|:||.:..|||.|:.:|.|:..||..|:.|||||...|...     |.|
plant   873 RSLLGSRDSEIGVVIEDKEFVESSMNGMKWMAGKFSYSLRCSLWSEHLGLHAGEIQK-----IED 932

  Fly  1267 PVCEKFWHGTWRRISMQNTEIYDEVFKCIPTDFVKTFASLRKYQE--EPPLAKTAPDL--AANR- 1326
            |:.:..:...|...:.:||:||::||.|||.:.:::.|:||....  :..|..|..||  |..| 
plant   933 PIKDATYKDLWMATAKKNTDIYNQVFSCIPNEHIRSRAALRHNMALCKDKLGHTTIDLGIAPERL 997

  Fly  1327 ----------ANDIQGYLVDLPLEFL-NKEVLTP 1349
                      ..:.:|.||..||:|: ::|.|.|
plant   998 ESCGSDSWEILKETRGNLVCFPLQFMCDQEDLRP 1031

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PldNP_001137610.1 PX_PLD 230..431 CDD:132805 46/215 (21%)
PH_PLD 419..564 CDD:269956 43/170 (25%)
PLDc_vPLD1_2_yPLD_like_1 590..734 CDD:197236 73/144 (51%)
PLDc_vPLD1_2_yPLD_like_2 1032..1220 CDD:197239 87/189 (46%)
PLDP2NP_187214.2 PLN02866 39..1046 CDD:215467 358/1269 (28%)
PX_PLD 42..205 CDD:132805 46/215 (21%)
PH_PLD 193..341 CDD:269956 43/172 (25%)
PLDc_vPLD1_2_yPLD_like_1 365..510 CDD:197236 73/144 (51%)
PLDc_vPLD1_2_yPLD_like_2 707..891 CDD:197239 88/192 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 168 1.000 Domainoid score I1180
eggNOG 1 0.900 - - E1_COG1502
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 533 1.000 Inparanoid score I276
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D755722at2759
OrthoFinder 1 1.000 - - FOG0001475
OrthoInspector 1 1.000 - - otm3161
orthoMCL 1 0.900 - - OOG6_100567
Panther 1 1.100 - - O PTHR18896
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1041
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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