DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pld and pld1b

DIOPT Version :9

Sequence 1:NP_001137610.1 Gene:Pld / 35554 FlyBaseID:FBgn0286511 Length:1364 Species:Drosophila melanogaster
Sequence 2:XP_021326023.1 Gene:pld1b / 572492 ZFINID:ZDB-GENE-070510-3 Length:1042 Species:Danio rerio


Alignment Length:1235 Identity:455/1235 - (36%)
Similarity:641/1235 - (51%) Gaps:248/1235 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 DSVTILSNVGDKPVLVERKETD--DDEEEFDDEENNSVVLRHEIPFTSIYGPSVKFNSFQR---K 225
            |...|:.|       ::.:|.|  |.|:|||.::.||...|  |||:::|    |...|:.   :
Zfish    18 DMTDIMEN-------LDTRELDIGDGEDEFDGQDPNSTDSR--IPFSAVY----KTKGFKEPGAR 69

  Fly   226 VFIPGREIHVRIVDTE--------------RSVTTHLLNPNLYTIELTHGPFKWTIKRRYKHFNS 276
            ||:....|..:|::.|              |||:..|  |.::.||:.||.|.|.:||:.|||..
Zfish    70 VFLTALPITAKILEVERFTSAQDRFNITAQRSVSKVL--PAVFKIEMKHGNFTWMVKRKEKHFME 132

  Fly   277 LHQQLSFFRTSLNIPFPSRSHKEKRTTLKATAREMADESTLKDLPSHTKVKQTSTPLRAEGRSSK 341
            ||::|..::|.|.||.|||||.|:|.|:                                     
Zfish   133 LHRELRAYKTFLRIPLPSRSHTERRQTI------------------------------------- 160

  Fly   342 IAGSNANNAMAMISPNHSSILAGLTPRRIQKKRKKKKKRKLPRFP-NRPESLVTVENLSVRIKQL 405
                                             .:..:|.:|..| ...|.|...|.:|.|.:||
Zfish   161 ---------------------------------NRNLERHMPTLPRGGGEELAREEQVSSRKRQL 192

  Fly   406 EDYLYNLLNISLYRSHHETLNFVEVSNVSFVPGMGIKGKEGVILKRTGSTR-PGQAGCNFFGCFQ 469
            ||||..||.:.:||::|.|:.|::||.:||:..:|.||.||::.||:|..| ||           
Zfish   193 EDYLNKLLKMPMYRNYHATMEFIDVSQLSFIHDLGPKGLEGMVHKRSGGHRIPG----------- 246

  Fly   470 KNCCVRCNYFCSDVVCGTWRNRWFFVKETCFGYIRPTDGSIRAVILFDQGFDVSTGIYQTGMRKG 534
            .|||....      :|..|..||...|::|...::|..|:|..|:|.|:.||:......|..:.|
Zfish   247 LNCCGHSK------MCYRWSKRWMVAKDSCLLLMKPDSGAISFVLLVDKEFDIKMDTKDTETKHG 305

  Fly   535 LQVLTNNRHIVLKCWTRRKCKEWMQYLKNTANSYARDFTLPNPHMSFAPMRANTHATWYVDGAQY 599
            :::.:.:|.:|||..:.|..:.|.|.:.:....|..:|...:...|||..:.|..:.|||:|.||
Zfish   306 VRIDSLSRTLVLKFTSYRHARWWGQAVDDFVRKYGSNFLKDHRFGSFANEQKNILSKWYVNGKQY 370

  Fly   600 MSAVADGLEAALEEIYIADWWLSPEIYMKRPALDGDYWRLDKILLRKAEQGVRVFVLLYKEVEMA 664
            |..||:.||.|.|||:|.||||||||::|||.::|:.||||.||.|:|::|||:||:||||||:|
Zfish   371 MEDVANALEEAEEEIFITDWWLSPEIFLKRPVVEGNRWRLDSILKRQAQKGVRIFVMLYKEVELA 435

  Fly   665 LGINSYYSKSTLAK-HENIKVMRHPDHARGGILLWAHHEKIVVIDQTYAFMGGIDLCYGRWDDHH 728
            |||||.|||.||.: |.||||||||||....:.|||||||||||||:.||:|||||.||||||..
Zfish   436 LGINSEYSKRTLLQLHPNIKVMRHPDHVSSSVYLWAHHEKIVVIDQSVAFVGGIDLAYGRWDDRE 500

  Fly   729 HRLTDLGSISTSSFSGSTRRTPSLYFTKDDTDSAFGSRKSSRNAHYDTSAKERPPSPPPDEPNTS 793
            |||||:||:        ||..|                .|:.||...:.|...|.:.        
Zfish   501 HRLTDIGSV--------TRTLP----------------VSAENASEASPAMAAPSNG-------- 533

  Fly   794 IELKTLKPGDRLLIPSTLVSSPGETPAESGIALEGMKL---NTPEMERKNVLDRLKNNAMKGARM 855
                          ||..:::....||::.   :..||   ..|:..|.::...|:.        
Zfish   534 --------------PSAALANGKNVPADTA---DQPKLKGHGKPKKTRFSIRRHLQK-------- 573

  Fly   856 GKDFMHRLTATETEEKSAEVYTIESEEATDHEVNLNMASGGQEVAITTSSTQILSE----FCGQA 916
                 ||.|:.::      |.::||.|.                  .:.:||.|..    ..|..
Zfish   574 -----HRPTSGDS------VSSVESSEE------------------KSEATQDLQADVIGLMGNT 609

  Fly   917 KYWFGKDYSNFILKDWMNLNSPFVDIIDRTTTPRMPWHDVGLCVVGTSARDVARHFIQRWNAMKL 981
            ::|.||||.||:.|||:.|:.||.|.|||..||||||||:...|.|.:|||||||||||||..|:
Zfish   610 RFWHGKDYCNFVHKDWIQLDKPFDDFIDRHITPRMPWHDIASVVHGQAARDVARHFIQRWNFTKI 674

  Fly   982 EKLR-DNTRFPYLMPKSY-------HQVRLNPNIQQNRQQRVTCQLLRSVSAWSCGFIEADLVEQ 1038
            .|.: .:..:|||:|||:       :||   |...|     ...|:|||.|.||.|.   ...|:
Zfish   675 MKPKYRSLSYPYLLPKSHTTANEIKYQV---PGCTQ-----TNVQVLRSASDWSAGI---KYHEE 728

  Fly  1039 SIHDAYIQTITKAQHYVYIENQFFITMQLGMGVPGAYNNVRNQIGETLFKRIVRAHKERKPFRVY 1103
            |||.||:..|..:|||:||||||||:.       .....|.|:||:.:.|||::|:::.|.:|||
Zfish   729 SIHTAYVNAIEHSQHYIYIENQFFISC-------ADSKVVHNRIGDAIAKRIIKAYRDGKKYRVY 786

  Fly  1104 VIMPLLPGFEGDVGGSTGIAVRAITHWNYASISRGRTSILTRLQEAGIANPENYISFHSLRNHSF 1168
            |:.|||||||||:....|.|::|:.|:||.::.||..||:::|::.......|||||..||.|:.
Zfish   787 VVTPLLPGFEGDINTGGGSAIQAVMHFNYRTMIRGDCSIISQLKKEMGDQWINYISFGGLRTHAE 851

  Fly  1169 LNNTPITELIYVHSKLLIADDRVVICGSANINDRSMIGKRDSEIAAILMDEEFEDGRMNGKKYPS 1233
            |....:|||||||||:|||||..||.||||||||||:||||||:|.|..|.......|:|::|.:
Zfish   852 LEGRLVTELIYVHSKMLIADDNTVIIGSANINDRSMLGKRDSEVAVIYEDIHTVKSVMDGQEYQA 916

  Fly  1234 GVFAGRLRKYLFKEHLGLLESEGSSRSDLDINDPVCEKFWHGTWRRISMQNTEIYDEVFKCIPTD 1298
            |.|...||...|:..||     .::...:|:.||:.::|:...|...:.:|..||..||:|:|:.
Zfish   917 GPFGLSLRLECFRMILG-----ANTDPSIDVTDPISDQFYKEVWMSTAARNATIYQRVFRCLPSS 976

  Fly  1299 FVKTFASLRKYQEEPPLAKTAPDLAANRANDIQGYLVDLPLEFLNKEVLTPPGTSKEGLIPTSVW 1363
            .|:|...|..:..:|.|.|..|..|......|:|:||..||:||:::.|.||..|||.::|..||
Zfish   977 DVRTILELDSFLSKPGLDKEDPARAQEELKKIRGFLVQFPLQFLSEQNLLPPIGSKEAMVPMEVW 1041

  Fly  1364  1363
            Zfish  1042  1041

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PldNP_001137610.1 PX_PLD 230..431 CDD:132805 55/215 (26%)
PH_PLD 419..564 CDD:269956 45/145 (31%)
PLDc_vPLD1_2_yPLD_like_1 590..734 CDD:197236 99/144 (69%)
PLDc_vPLD1_2_yPLD_like_2 1032..1220 CDD:197239 95/187 (51%)
pld1bXP_021326023.1 PLN03008 67..1027 CDD:331186 428/1157 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587183
Domainoid 1 1.000 187 1.000 Domainoid score I3265
eggNOG 1 0.900 - - E1_COG1502
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 751 1.000 Inparanoid score I547
OMA 1 1.010 - - QHG58673
OrthoDB 1 1.010 - - D330134at33208
OrthoFinder 1 1.000 - - FOG0001475
OrthoInspector 1 1.000 - - otm24539
orthoMCL 1 0.900 - - OOG6_100567
Panther 1 1.100 - - O PTHR18896
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1041
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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