DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pld and pld2

DIOPT Version :9

Sequence 1:NP_001137610.1 Gene:Pld / 35554 FlyBaseID:FBgn0286511 Length:1364 Species:Drosophila melanogaster
Sequence 2:XP_005165435.1 Gene:pld2 / 565743 ZFINID:ZDB-GENE-060216-4 Length:948 Species:Danio rerio


Alignment Length:1196 Identity:438/1196 - (36%)
Similarity:590/1196 - (49%) Gaps:274/1196 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 RKETDD-DEEEFDDEENNS-----VVLRHEIPFTSIYGPSVKFNSFQRKVFIPGREIHVRIVDTE 241
            ||..|. .|::....||||     :|:.|   ...:.|.|:       ...|.|..|..::.:||
Zfish    13 RKCVDSITEDQLKSIENNSEKRDFIVVHH---LADLKGGSI-------SPLIYGTPITCKVENTE 67

  Fly   242 RSVT---THLLNPNLYTIELTHGPFKWTIKRRYKHFNSLHQQLSFFRTSLNIPFPSRSHKEKRTT 303
            |..|   .|:.  .|||:.||||.|.||:||:||||..||                         
Zfish    68 RYTTRSKVHVC--TLYTVRLTHGEFTWTVKRKYKHFQELH------------------------- 105

  Fly   304 LKATAREMADESTLKDLPSHTKVKQTSTPLRAEGRSSKIAGSNANNAMAMISPNHSSILAGLTPR 368
                          :||..| ||.....||   ||.:                .....|||||  
Zfish   106 --------------RDLYKH-KVMLQFLPL---GRFA----------------IQRQQLAGLT-- 134

  Fly   369 RIQKKRKKKKKRKLPRFPNRPESLVTVENLSVRIKQLEDYLYNLLNISLYRSHHETLNFVEVSNV 433
                       .::|.......    :...|.:.|.||:||.|||..:.|:::|..::|:.:|.:
Zfish   135 -----------EEMPTLHGTDR----IRRTSSKPKYLEEYLNNLLENTFYKNYHGMMDFLAISPL 184

  Fly   434 SFVPGMGIKGKEGVILKRTGSTRPGQAGCNFFGCFQKNCCVRCNYFCSDVVCGTWRNRWFFVKET 498
            ||:..:|.||.||.||||:|..|  ..|.|         |:..:.||.     .|..||..||::
Zfish   185 SFIRDLGPKGLEGYILKRSGGHR--IQGLN---------CIGHHQFCF-----RWSRRWLVVKDS 233

  Fly   499 CFGYIRPTDGSIRAVILFDQGFDVSTGIYQTGMRKGLQVLTNNRHIVLKCWTRRKCKEWMQYLKN 563
            ...|:....|.:..|:|||....|..|...|.::.|:.:...:|.:|:||.:.|:.:.|...:::
Zfish   234 FLLYMSRDPGIVSFVLLFDPELKVLVGRVYTDIQHGICIENFDRKLVIKCSSYRQAQWWSHEIRS 298

  Fly   564 TANSYARDFTLPNPHMSFAPMRANTHATWYVDGAQYMSAVADGLEAALEEIYIADWWLSPEIYMK 628
            .  |...||...:....|||.|.:|...|||:|..|.|.:||.||.|.|||:|.|||||||:::|
Zfish   299 L--SERCDFYKLHRFEGFAPPRPDTLTKWYVNGHGYFSDLADALEQAKEEIFITDWWLSPEVFLK 361

  Fly   629 RPALDGDYWRLDKILLRKAEQGVRVFVLLYKEVEMALGINSYYSKSTL-AKHENIKVMRHPDHAR 692
            ||| .|.||||||||.|||||||:|.||||||||:||||||.|||..| :.|.||||||||||..
Zfish   362 RPA-TGTYWRLDKILKRKAEQGVKVCVLLYKEVELALGINSGYSKRKLMSLHPNIKVMRHPDHVA 425

  Fly   693 GGILLWAHHEKIVVIDQTYAFMGGIDLCYGRWDDHHHRLTDLGSISTSSFSGSTRRTPSLYFTKD 757
            ..::|||||||:|.|||:.||:||:||.:|||||..:||:||.|                     
Zfish   426 SVVVLWAHHEKMVAIDQSVAFVGGLDLAFGRWDDSDYRLSDLDS--------------------- 469

  Fly   758 DTDSAFGSRKSSRNAHYDTSAKERPPSPPPDEPNTSIELKTLKPGDRLLIPSTLVSSPGETPAES 822
                                    |..|.|.|..:.:...:|..||                   
Zfish   470 ------------------------PKQPSPPEAASELPTPSLSQGD------------------- 491

  Fly   823 GIALEGMKLNTPEMERKNVLDRLKNNAMKGARMGKDFMHRLTATETEEKSAEVYTIESEEATDHE 887
                                                         |.:.||...|..:.|..| |
Zfish   492 ---------------------------------------------TVDGSAVPLTQPASECED-E 510

  Fly   888 VNLNMASGGQEVAITTSSTQILSEFCGQAKYWFGKDYSNFILKDWMNLNSPFVDIIDRTTTPRMP 952
            |:|:                     | .|..|.||||||||.:||..|:.||.|.:|||..||:|
Zfish   511 VDLS---------------------C-NALLWLGKDYSNFIKRDWTQLDQPFQDNVDRTQVPRIP 553

  Fly   953 WHDVGLCVVGTSARDVARHFIQRWNAMKL--EKLRDNTRFPYLMPKSYHQVRLNPNIQQNRQQRV 1015
            |.|:|....|.:|||:|||||||||..|:  .|.:|:. :|||:|||:......| .......:.
Zfish   554 WRDLGAAHHGKAARDLARHFIQRWNFTKIFKNKYKDDF-YPYLLPKSHCTSDTLP-FSIPGATKA 616

  Fly  1016 TCQLLRSVSAWSCGFIEADLVEQSIHDAYIQTITKAQHYVYIENQFFITMQLGMGVPGAYNNVRN 1080
            :.|:||||..||.|     ..|.||.:||:..|..:|||:|:||||||:.       ....||:|
Zfish   617 SVQVLRSVDRWSAG-----TCEHSILNAYVHVIENSQHYIYLENQFFISC-------AEEKNVQN 669

  Fly  1081 QIGETLFKRIVRAHKERKPFRVYVIMPLLPGFEGDVGGSTGIAVRAITHWNYASISRGRTSILTR 1145
            .||:.:.|||:|||.|.|.|||:|::|||||||||:....|.|::||.|:.|.:|:||..|||:|
Zfish   670 TIGDAIVKRILRAHSEGKKFRVFVVIPLLPGFEGDISQGGGNAIQAILHFTYRTINRGEHSILSR 734

  Fly  1146 LQEAGIANPENYISFHSLRNHSFLNNTPITELIYVHSKLLIADDRVVICGSANINDRSMIGKRDS 1210
            |:|........|.|...||.||.|.::|:|||||||||.||||||..|.||||||||||:|.|||
Zfish   735 LKEQMQDKWTQYFSLCGLRTHSQLGSSPVTELIYVHSKALIADDRCYIIGSANINDRSMLGTRDS 799

  Fly  1211 EIAAILMDEEFEDGRMNGKKYPSGVFAGRLRKYLFKEHLGLLESEGSSRSD--LDINDPVCEKFW 1273
            |:|.::.|||.....|:|::|.:|..|..|||..|...||       ::||  |||:||:.:.|:
Zfish   800 ELAVLVEDEERISSVMDGEEYQAGPLALALRKECFSVLLG-------AKSDPSLDIDDPISDHFF 857

  Fly  1274 HGTWRRISMQNTEIYDEVFKCIPTDFVKTFASLRKYQEEPPLAKTAPDLAANRANDIQGYLVDLP 1338
            :..|.:::..|..||::||:|:|.|.::....|.:::....|:.|.|:.|......|:|.||..|
Zfish   858 NDVWNKVAQTNAIIYEKVFRCLPLDSIRNLRELMEHKNSENLSLTDPEKAREELQAIRGILVHFP 922

  Fly  1339 LEFLNKEVLTPPGTSKEGLIPTSVWT 1364
            |.||.:|.|.||..||||::|..|||
Zfish   923 LHFLCEENLLPPLKSKEGIVPIEVWT 948

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PldNP_001137610.1 PX_PLD 230..431 CDD:132805 52/203 (26%)
PH_PLD 419..564 CDD:269956 42/144 (29%)
PLDc_vPLD1_2_yPLD_like_1 590..734 CDD:197236 96/144 (67%)
PLDc_vPLD1_2_yPLD_like_2 1032..1220 CDD:197239 98/187 (52%)
pld2XP_005165435.1 PX_PLD2 56..182 CDD:132830 52/203 (26%)
PLN02866 81..939 CDD:215467 410/1105 (37%)
PH_PLD 171..297 CDD:269956 42/141 (30%)
PLDc_vPLD2_1 323..467 CDD:197301 96/144 (67%)
PLDc_vPLD2_2 628..809 CDD:197303 100/192 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587184
Domainoid 1 1.000 236 1.000 Domainoid score I2276
eggNOG 1 0.900 - - E1_COG1502
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58673
OrthoDB 1 1.010 - - D330134at33208
OrthoFinder 1 1.000 - - FOG0001475
OrthoInspector 1 1.000 - - otm24539
orthoMCL 1 0.900 - - OOG6_100567
Panther 1 1.100 - - O PTHR18896
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2299
SonicParanoid 1 1.000 - - X1041
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.840

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