DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pld and Pld2

DIOPT Version :9

Sequence 1:NP_001137610.1 Gene:Pld / 35554 FlyBaseID:FBgn0286511 Length:1364 Species:Drosophila melanogaster
Sequence 2:XP_038941178.1 Gene:Pld2 / 25097 RGDID:3350 Length:972 Species:Rattus norvegicus


Alignment Length:1243 Identity:448/1243 - (36%)
Similarity:598/1243 - (48%) Gaps:337/1243 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 PDSVTILSNVGDKPVLVERKETDDDEEEFDDEENNSVVLRHEIPFTSIYGPSVKFNSFQRKVFIP 229
            ||.|..|            ||.:|..:...             ||.:||  .::.......||.|
  Rat    24 PDEVDTL------------KEGEDPADRMH-------------PFLAIY--DLQPLRAHPLVFAP 61

  Fly   230 GREIHVRIVDTERSVTTHLLNP-NLYTIELTHGPFKWTIKRRYKHFNSLHQQLSFFRTSLNIPFP 293
            |..:..::|.|||..:...:.. .||::.||||.|.||.|::::||..||               
  Rat    62 GVPVIAQVVGTERYTSGSKVGTCTLYSVRLTHGDFTWTTKKKFRHFQELH--------------- 111

  Fly   294 SRSHKEKRTTLKATAREMADESTLKDLPSHTKVKQTSTPLRAEGRSSKIAGSNANNAMAMISPNH 358
                                    :||..| ||..:..||                  |..:..|
  Rat   112 ------------------------RDLQRH-KVLMSLLPL------------------ARFAAAH 133

  Fly   359 SSILAGLTPRRIQKKRKKKKKRKLPRFPNRPESLVTVENLSVRIKQLEDYLYNLLNISLYRSHHE 423
            |       |.|      :.....:|..| |..|..:..:.:.:.|.||:||..||.:|.||::|.
  Rat   134 S-------PAR------EAANENIPSLP-RGGSEGSARHTASKQKYLENYLNRLLTMSFYRNYHA 184

  Fly   424 TLNFVEVSNVSFVPGMGIKGKEGVILKRTGSTR-PGQAGCNFFGCFQKNCCVRCNYFCSDVVCGT 487
            ...|:|||.:||:|.:|.||.||||.||:|..| ||           ..||.|      |.||..
  Rat   185 MTEFLEVSQLSFIPDLGSKGLEGVIRKRSGGHRVPG-----------FTCCGR------DQVCYR 232

  Fly   488 WRNRWFFVKETCFGYIRPTDGSIRAVILFDQGFDVSTGIYQTGMRKGLQVLTNNRHIVLKCWTRR 552
            |..||..||::...|:||..|:|..|.|||.||:|..|...|..|.|:::.|::|.::|||.:.|
  Rat   233 WSKRWLVVKDSFLLYMRPETGAISFVQLFDPGFEVQVGKRSTEARYGVRIDTSHRSLILKCSSYR 297

  Fly   553 KCKEWMQYLKNTANSYARDFTLPNPHMSFAPMRANTHATWYVDGAQYMSAVADGLEAALEEIYIA 617
            :.:.|.|.:...|....|||...:.|.|:||.|..|.|.|:|:||.|.:||||.:..|.|||:|.
  Rat   298 QARWWGQEITELAQGPGRDFLQLHQHDSYAPPRPGTLARWFVNGAGYFAAVADAILRAREEIFIT 362

  Fly   618 DWWLSPEIYMKRPALDGDYWRLDKILLRKAEQGVRVFVLLYKEVEMALGINSYYSKSTL-AKHEN 681
            |||||||||:|||| ..|.||||.:|.||||:||||.:||:||||:||||||.|||.|| ..|.|
  Rat   363 DWWLSPEIYLKRPA-HSDDWRLDIMLKRKAEEGVRVSILLFKEVELALGINSGYSKRTLMLLHPN 426

  Fly   682 IKVMRHPDHARGGILLWAHHEKIVVIDQTYAFMGGIDLCYGRWDDHHHRLTDLGSISTSSFSGST 746
            ||||||||.    :.|||||||::|:||..||:||:||.||||||..:||||||           
  Rat   427 IKVMRHPDL----VTLWAHHEKLLVVDQAVAFLGGLDLAYGRWDDVQYRLTDLG----------- 476

  Fly   747 RRTPSLYFTKDDTDSAFGSRKSSRNAHYDTSAKERPPSPPPDEPNTSIELKTLKPGDRLLIPSTL 811
                                                      :|:.|.:.:|..||         
  Rat   477 ------------------------------------------DPSESADSQTPTPG--------- 490

  Fly   812 VSSPGETPAESGIALEGMKLNTPEMERKNVLDRLKNNAMKGARMGKDFMHRLTATETEEKSAEVY 876
             |.|..||                                      |..|               
  Rat   491 -SDPAATP--------------------------------------DLSH--------------- 501

  Fly   877 TIESEEATDHEVNLNMASGGQEVAITTSSTQILSEFCGQAKYWFGKDYSNFILKDWMNLNSPF-- 939
                                             :.|     :|.||||||.|.|||:.|:.||  
  Rat   502 ---------------------------------NHF-----FWLGKDYSNLITKDWVQLDRPFEE 528

  Fly   940 -------------------------------------VDIIDRTTTPRMPWHDVGLCVVGTSARD 967
                                                 .|.|||.|||||||.|||:.|.|.:|||
  Rat   529 EVRTGTQPEQEPGGLLLPGSFPVDSSVSFLPEPRTTTPDFIDRETTPRMPWRDVGVVVHGVAARD 593

  Fly   968 VARHFIQRWNAMKLEKLRDN-TRFPYLMPKSYHQVRLNPNIQQNRQQRVTCQLLRSVSAWSCGFI 1031
            :|||||||||..|..|.|.. .::|||:|||.......|.|... .|..|.|:||||..||.|.:
  Rat   594 LARHFIQRWNFTKTIKARYKIPQYPYLLPKSASTANHLPFIIPG-AQCATVQVLRSVDRWSAGTL 657

  Fly  1032 EADLVEQSIHDAYIQTITKAQHYVYIENQFFITMQLGMGVPGAYNNVRNQIGETLFKRIVRAHKE 1096
            |:     ||.:||:.||.::||::||||||||:...|       ..|.|::|:.:..||::||::
  Rat   658 ES-----SILNAYLHTIRESQHFLYIENQFFISCSDG-------RTVLNKVGDEIVDRILKAHEQ 710

  Fly  1097 RKPFRVYVIMPLLPGFEGDVGGSTGIAVRAITHWNYASISRGRTSILTRLQEAGIANPENYISFH 1161
            .:.|||||::|||||||||:....|.:::||.|:.|.::.||..|||.||:.|......:|:|..
  Rat   711 GQCFRVYVLLPLLPGFEGDISTGGGNSIQAILHFTYRTLCRGEYSILHRLKAAMGTAWRDYMSIC 775

  Fly  1162 SLRNHSFLNNTPITELIYVHSKLLIADDRVVICGSANINDRSMIGKRDSEIAAILMDEEFEDGRM 1226
            .||.|..|...||:||||:||||||||||.||.|||||||||::||||||:|.::.|.|.|...|
  Rat   776 GLRTHGELGGHPISELIYIHSKLLIADDRTVIIGSANINDRSLLGKRDSELAILIEDTEMEPSLM 840

  Fly  1227 NGKKYPSGVFAGRLRKYLFKEHLGLLESEGSSRSDLDINDPVCEKFWHGTWRRISMQNTEIYDEV 1291
            :|.:|.:|.||..|||:.|...||     .::..|||:.||||:.|:. .|:..:..|..||:::
  Rat   841 DGVEYQAGRFALSLRKHCFSVILG-----ANTWPDLDLRDPVCDDFFQ-LWQETAENNATIYEQI 899

  Fly  1292 FKCIPTDFVKTFASLRKYQEEPPLAKTAPDLAANRANDIQGYLVDLPLEFLNKEVLTPPGTSKEG 1356
            |:|:|::..::..:||:|.....||..:|.||.:....|:|:||..||:||..|.|.||..||||
  Rat   900 FRCLPSNATRSLRALREYVAVESLATVSPSLAQSELAHIRGHLVHFPLKFLEDESLLPPLGSKEG 964

  Fly  1357 LIPTSVWT 1364
            :||..|||
  Rat   965 MIPLEVWT 972

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PldNP_001137610.1 PX_PLD 230..431 CDD:132805 48/201 (24%)
PH_PLD 419..564 CDD:269956 57/145 (39%)
PLDc_vPLD1_2_yPLD_like_1 590..734 CDD:197236 94/144 (65%)
PLDc_vPLD1_2_yPLD_like_2 1032..1220 CDD:197239 93/187 (50%)
Pld2XP_038941178.1 PLN02866 67..957 CDD:215467 422/1156 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346218
Domainoid 1 1.000 233 1.000 Domainoid score I2318
eggNOG 1 0.900 - - E1_COG1502
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 716 1.000 Inparanoid score I610
OMA 1 1.010 - - QHG58673
OrthoDB 1 1.010 - - D330134at33208
OrthoFinder 1 1.000 - - FOG0001475
OrthoInspector 1 1.000 - - otm45467
orthoMCL 1 0.900 - - OOG6_100567
Panther 1 1.100 - - O PTHR18896
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1041
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.810

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