DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pld and Pld1

DIOPT Version :9

Sequence 1:NP_001137610.1 Gene:Pld / 35554 FlyBaseID:FBgn0286511 Length:1364 Species:Drosophila melanogaster
Sequence 2:NP_001355596.1 Gene:Pld1 / 18805 MGIID:109585 Length:1074 Species:Mus musculus


Alignment Length:1230 Identity:456/1230 - (37%)
Similarity:645/1230 - (52%) Gaps:202/1230 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 TILSNVGDKPVLVERKET-----DDDEEEFDDEENNSVVLRHEIPFTSIYGPSVKFNSFQRKVFI 228
            |:.....|...|:|..:|     :.:|.|:|....:.......|||:|||. :..|.....:.::
Mouse    13 TLQKIAADMSNLIENLDTRELHFEGEEVEYDASPGDPKAQEGCIPFSSIYN-TQGFKEPNIQTYL 76

  Fly   229 PGREIHVRIVDTER-SVTTHLLNPNLYTIELTHGPFKWTIKRRYKHFNSLHQQLSFFRTSLNIPF 292
            .|..|..::::.|| :.|:.:.:.||||||||||.|.|.:||::|||...|::|..::..:.||.
Mouse    77 SGCPIKAQVLEVERFTSTSRVPSINLYTIELTHGEFTWQVKRKFKHFQEFHRELLKYKAFIRIPI 141

  Fly   293 PSRSHKEKRTTLKATAREMADESTLKDLPSHTKVKQTSTPLRAEGRSSKIAGSNANNAMAMISPN 357
            |::.|..:|..:|...|||                                              
Mouse   142 PTKRHTFRRQNVKEEPREM---------------------------------------------- 160

  Fly   358 HSSILAGLTPRRIQKKRKKKKKRKLPRFPNRPESLVTVENLSVRIKQLEDYLYNLLNISLYRSHH 422
                                     |..|...|:.:..|....|.|||||||..:|.:.:||::|
Mouse   161 -------------------------PSLPRSSENAIQEEQFFGRRKQLEDYLTKILKMPMYRNYH 200

  Fly   423 ETLNFVEVSNVSFVPGMGIKGKEGVILKRTGSTR-PGQAGCNFFGCFQKNCCVRCNYFCSDVVCG 486
            .|..|::||.:||:..:|.||.||:|:||:|..| ||           .|||....      .|.
Mouse   201 ATTEFLDVSQLSFIHDLGPKGLEGMIMKRSGGHRIPG-----------VNCCGHGR------ACY 248

  Fly   487 TWRNRWFFVKETCFGYIRPTDGSIRAVILFDQGFDVSTGIYQTGMRKGLQVLTNNRHIVLKCWTR 551
            .|..||..||::...|::|..|:|..|:|.|:.|.|..|..:|..:.||::...:|.::|||.:.
Mouse   249 RWSKRWLIVKDSFLLYMKPDSGAIAFVLLVDKEFRVKVGRKETETKYGLRIDNLSRTLILKCNSY 313

  Fly   552 RKCKEWMQYLKNTANSYARDFTLPNPHMSFAPMRANTHATWYVDGAQYMSAVADGLEAALEEIYI 616
            |..:.|...::.....:..||...:...|:|.:..||.|.|||:...|...:|:.:|.|.|||:|
Mouse   314 RHARWWGGAIEEFIRKHGADFLKDHRFGSYAALHENTLAKWYVNAKGYFEDIANAMEEASEEIFI 378

  Fly   617 ADWWLSPEIYMKRPALDGDYWRLDKILLRKAEQGVRVFVLLYKEVEMALGINSYYSKSTLAK-HE 680
            .||||||||::|||.::|:.||||.||.|||:||||:|::||||||:||||||.|||.||.: |.
Mouse   379 TDWWLSPEIFLKRPVVEGNRWRLDCILKRKAQQGVRIFIMLYKEVELALGINSEYSKRTLMRLHP 443

  Fly   681 NIKVMRHPDHARGGILLWAHHEKIVVIDQTYAFMGGIDLCYGRWDDHHHRLTDLGSIS--TSSFS 743
            ||||||||||....:.|||||||:|:|||:.||:|||||.||||||:.|||||:||:.  ||..|
Mouse   444 NIKVMRHPDHVSSSVYLWAHHEKLVIIDQSVAFVGGIDLAYGRWDDNEHRLTDVGSVKRVTSGLS 508

  Fly   744 GSTRRTPSLYFTKDDTDSAFGSRKSSRNAHYDTSAKERPPSPPPDEPNTSIELKTLKPGDRLLIP 808
            ..:....|:    :..:|.  |.|.....|     |:.|.|...||  |.::||           
Mouse   509 LGSLTAASV----ESMESL--SLKDKHEFH-----KKEPISKIVDE--TDMKLK----------- 549

  Fly   809 STLVSSPGETPAESGIALEGMKLNTPEMERKNVLDRLKNNAMKGARMGKDFMHRLTATETEEKSA 873
                          ||. :..|.:...:.|               ::.:..:|...:..:.:.::
Mouse   550 --------------GIG-KSRKFSKFSLYR---------------QLHRHHLHNADSISSIDSTS 584

  Fly   874 EVYT-IESEEATDH----EVNLNMASGGQEVAITTSSTQI---------LSEFCGQAKYWFGKDY 924
            ..:: ..|.:...|    .:.|...|...|..:|..||..         :.|..|:.::|.||||
Mouse   585 SYFSHCRSHQNLIHGLKPHLKLFHPSSESEQGLTRHSTDTGSIRSVQTGVGELHGETRFWHGKDY 649

  Fly   925 SNFILKDWMNLNSPFVDIIDRTTTPRMPWHDVGLCVVGTSARDVARHFIQRWNAMKLEKLR-DNT 988
            .||:.|||:.|:.||.|.|||.:||||||||:|..|.|.:|||||||||||||..|:.|.: .:.
Mouse   650 CNFVFKDWVQLDKPFADFIDRYSTPRMPWHDIGSVVHGKAARDVARHFIQRWNFTKIMKPKYRSL 714

  Fly   989 RFPYLMPKSY---HQVRLNPNIQQNRQQRVTCQLLRSVSAWSCGFIEADLVEQSIHDAYIQTITK 1050
            .:|:|:|||.   |::|    .|.........|||||.:.||.|....   |:|||.|||..|..
Mouse   715 SYPFLLPKSQATAHELR----YQVPGAVPAKVQLLRSAADWSAGIKHH---EESIHAAYIHVIEN 772

  Fly  1051 AQHYVYIENQFFITMQLGMGVPGAYNNVRNQIGETLFKRIVRAHKERKPFRVYVIMPLLPGFEGD 1115
            ::||:||||||||:.       .....|.|::|:.:.:||::||:|.:.:|||:::|||||||||
Mouse   773 SKHYIYIENQFFISC-------ADDKVVFNKVGDAIAQRILKAHREGQRYRVYIVIPLLPGFEGD 830

  Fly  1116 VGGSTGIAVRAITHWNYASISRGRTSILTRLQEAGIANPE------NYISFHSLRNHSFLNNTPI 1174
            :....|.|::||.|:||.::.||.:|||.:|:      ||      |||||..||.|:.|....:
Mouse   831 ISTGGGNALQAIMHFNYRTMCRGESSILEQLK------PELGNKWINYISFCGLRTHAELEGNLV 889

  Fly  1175 TELIYVHSKLLIADDRVVICGSANINDRSMIGKRDSEIAAILMDEEFEDGRMNGKKYPSGVFAGR 1239
            |||||||||||||||..||.||||||||||:||||||:|.|:.|.|.....|:||:|.:|.||..
Mouse   890 TELIYVHSKLLIADDNTVIIGSANINDRSMLGKRDSEMAVIVQDTETVPSVMDGKEYQAGRFARD 954

  Fly  1240 LRKYLFKEHLGLLESEGSSRSDLDINDPVCEKFWHGTWRRISMQNTEIYDEVFKCIPTDFVKTFA 1304
            ||...|:..||.|.....     |:.|||.:||:...|...:.:|..|||:||:|:|.|.|....
Mouse   955 LRLECFRLVLGYLSDPSE-----DLQDPVSDKFFKEIWVSTAARNATIYDKVFRCLPNDEVHNLI 1014

  Fly  1305 SLRKYQEEPPLAKTAPDLAANRANDIQGYLVDLPLEFLNKEVLTPPGTSKEGLIPTSVWT 1364
            .||.:..:|.|||.....|......|:|:||..||.||::|.|.|...:||.::|..|||
Mouse  1015 QLRDFINKPILAKEDRLRAEEELRKIRGFLVQFPLYFLSEENLLPSVGTKEAIVPMEVWT 1074

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PldNP_001137610.1 PX_PLD 230..431 CDD:132805 51/201 (25%)
PH_PLD 419..564 CDD:269956 48/145 (33%)
PLDc_vPLD1_2_yPLD_like_1 590..734 CDD:197236 94/144 (65%)
PLDc_vPLD1_2_yPLD_like_2 1032..1220 CDD:197239 98/193 (51%)
Pld1NP_001355596.1 PLN02866 82..1059 CDD:215467 432/1143 (38%)
Catalytic 463..928 213/538 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842747
Domainoid 1 1.000 175 1.000 Domainoid score I3636
eggNOG 1 0.900 - - E1_COG1502
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 776 1.000 Inparanoid score I529
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58673
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001475
OrthoInspector 1 1.000 - - otm43397
orthoMCL 1 0.900 - - OOG6_100567
Panther 1 1.100 - - LDO PTHR18896
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2299
SonicParanoid 1 1.000 - - X1041
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

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