DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pld and pgs1

DIOPT Version :9

Sequence 1:NP_001137610.1 Gene:Pld / 35554 FlyBaseID:FBgn0286511 Length:1364 Species:Drosophila melanogaster
Sequence 2:XP_003199680.3 Gene:pgs1 / 100534896 -ID:- Length:540 Species:Danio rerio


Alignment Length:483 Identity:92/483 - (19%)
Similarity:178/483 - (36%) Gaps:131/483 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   787 PDEPNTSIE--LKTLKPGDRLLIPSTLVSSPGETPAESGI------ALE-GMKLNTPEMERKNVL 842
            |||...:::  :||.|  .|:::.|..:   |..|.|..:      ||| ..:.:||:::...:|
Zfish    98 PDEFYQAMKARIKTAK--SRVVMASLYL---GTGPLEQDLVDCMEEALERSQEDHTPDLKVSFLL 157

  Fly   843 DRLKNNAMKGARMGKDFMHRLTATETEEKSAEVYTIESEEATDHEVNL------------NMASG 895
            |..:.:  :|....:..:..|.....|:....:|         |..:|            |...|
Zfish   158 DYTRGS--RGKHNSRTMLLPLLQRFPEQMRVSLY---------HTPDLRGLLRLLVPERFNETIG 211

  Fly   896 GQEVAITTSSTQILSEFCGQAKYWFGKDYSNFILKDWMNL-NSPFVDIIDRTTTPRMPWHDVGLC 959
            .|.:                ..|.|    .|.::....|| :|.|.:..||             .
Zfish   212 VQHI----------------KAYLF----DNSLIISGANLSDSYFTNRQDR-------------Y 243

  Fly   960 VVGTSARDVARHFIQRWNA---MKLEKLRDNTRFPYLMPKSYHQVRLN-PNIQQNRQQRV----- 1015
            |:....::||..|.:...|   :.::.|.||:  ..:|....|..:.| .:..::.|:|:     
Zfish   244 VLLEDCKEVADFFAELVGAVGDVSMQLLPDNS--VEMMEGRVHPYKGNRADFSESAQRRIMEVVN 306

  Fly  1016 TCQLLRSVSAWSCGFIEADLVEQSIHDAYIQTITKAQHY-VYIENQFFITMQL-----GMGV--- 1071
            |.::.:|:....|. ...|....|.:|.:|..:.:.:.. ::::.|  :|.:|     |..|   
Zfish   307 TARIRQSMLKTECS-DHPDSNGTSPNDTWIFPLVQMKPLGIHLDEQ--VTKRLLTEAGGDAVVYL 368

  Fly  1072 -PGAYNNVRNQIGETLFKRIVRAHKERKPFRVYVIMPLLPGFEGDVGGSTGIAVRAITHWNYASI 1135
             .|.:|..|     |..:.::.|..:   :|:.:..|.:.||.| ..|..|....|..|     :
Zfish   369 TSGYFNLTR-----TYMQLVLGAEAD---YRILMASPEVNGFFG-AKGVAGAIPEAYVH-----L 419

  Fly  1136 SRGRTSILTRLQEAGIANPENY----ISFHSLRNHSFL--NNTPITELIYVHSKLLIADDRVVIC 1194
            :|...:.:.:|.:....:...|    .:||:.....::  .:.|...||                
Zfish   420 ARQFYNKVCQLGQQSRVHLHEYHRPDWTFHAKGLWYYVGGRDCPCLTLI---------------- 468

  Fly  1195 GSANINDRSMIGKRDSEIAAILMDEEFE 1222
            ||.|...||:....:::||.:..:||.:
Zfish   469 GSPNFGYRSVHRDLEAQIAIVTENEELQ 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PldNP_001137610.1 PX_PLD 230..431 CDD:132805
PH_PLD 419..564 CDD:269956
PLDc_vPLD1_2_yPLD_like_1 590..734 CDD:197236
PLDc_vPLD1_2_yPLD_like_2 1032..1220 CDD:197239 38/203 (19%)
pgs1XP_003199680.3 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1502
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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