DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pld and pgs1

DIOPT Version :10

Sequence 1:NP_001137610.1 Gene:Pld / 35554 FlyBaseID:FBgn0286511 Length:1364 Species:Drosophila melanogaster
Sequence 2:XP_003199680.3 Gene:pgs1 / 100534896 ZFINID:ZDB-GENE-170216-1 Length:540 Species:Danio rerio


Alignment Length:483 Identity:92/483 - (19%)
Similarity:178/483 - (36%) Gaps:131/483 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   787 PDEPNTSIE--LKTLKPGDRLLIPSTLVSSPGETPAESGI------ALE-GMKLNTPEMERKNVL 842
            |||...:::  :||.|  .|:::.|..:   |..|.|..:      ||| ..:.:||:::...:|
Zfish    98 PDEFYQAMKARIKTAK--SRVVMASLYL---GTGPLEQDLVDCMEEALERSQEDHTPDLKVSFLL 157

  Fly   843 DRLKNNAMKGARMGKDFMHRLTATETEEKSAEVYTIESEEATDHEVNL------------NMASG 895
            |..:.:  :|....:..:..|.....|:....:|         |..:|            |...|
Zfish   158 DYTRGS--RGKHNSRTMLLPLLQRFPEQMRVSLY---------HTPDLRGLLRLLVPERFNETIG 211

  Fly   896 GQEVAITTSSTQILSEFCGQAKYWFGKDYSNFILKDWMNL-NSPFVDIIDRTTTPRMPWHDVGLC 959
            .|.:                ..|.|    .|.::....|| :|.|.:..||             .
Zfish   212 VQHI----------------KAYLF----DNSLIISGANLSDSYFTNRQDR-------------Y 243

  Fly   960 VVGTSARDVARHFIQRWNA---MKLEKLRDNTRFPYLMPKSYHQVRLN-PNIQQNRQQRV----- 1015
            |:....::||..|.:...|   :.::.|.||:  ..:|....|..:.| .:..::.|:|:     
Zfish   244 VLLEDCKEVADFFAELVGAVGDVSMQLLPDNS--VEMMEGRVHPYKGNRADFSESAQRRIMEVVN 306

  Fly  1016 TCQLLRSVSAWSCGFIEADLVEQSIHDAYIQTITKAQHY-VYIENQFFITMQL-----GMGV--- 1071
            |.::.:|:....|. ...|....|.:|.:|..:.:.:.. ::::.|  :|.:|     |..|   
Zfish   307 TARIRQSMLKTECS-DHPDSNGTSPNDTWIFPLVQMKPLGIHLDEQ--VTKRLLTEAGGDAVVYL 368

  Fly  1072 -PGAYNNVRNQIGETLFKRIVRAHKERKPFRVYVIMPLLPGFEGDVGGSTGIAVRAITHWNYASI 1135
             .|.:|..|     |..:.::.|..:   :|:.:..|.:.||.| ..|..|....|..|     :
Zfish   369 TSGYFNLTR-----TYMQLVLGAEAD---YRILMASPEVNGFFG-AKGVAGAIPEAYVH-----L 419

  Fly  1136 SRGRTSILTRLQEAGIANPENY----ISFHSLRNHSFL--NNTPITELIYVHSKLLIADDRVVIC 1194
            :|...:.:.:|.:....:...|    .:||:.....::  .:.|...||                
Zfish   420 ARQFYNKVCQLGQQSRVHLHEYHRPDWTFHAKGLWYYVGGRDCPCLTLI---------------- 468

  Fly  1195 GSANINDRSMIGKRDSEIAAILMDEEFE 1222
            ||.|...||:....:::||.:..:||.:
Zfish   469 GSPNFGYRSVHRDLEAQIAIVTENEELQ 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PldNP_001137610.1 PX_PLD 230..431 CDD:132805
PLN02866 388..1349 CDD:215467 92/483 (19%)
pgs1XP_003199680.3 PLDc_PGS1_euk_1 91..263 CDD:197233 40/213 (19%)
PLDc_PGS1_euk_2 333..518 CDD:197235 37/196 (19%)
Blue background indicates that the domain is not in the aligned region.

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