DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pld and pld2

DIOPT Version :9

Sequence 1:NP_001137610.1 Gene:Pld / 35554 FlyBaseID:FBgn0286511 Length:1364 Species:Drosophila melanogaster
Sequence 2:XP_031753569.1 Gene:pld2 / 100216200 XenbaseID:XB-GENE-5998608 Length:939 Species:Xenopus tropicalis


Alignment Length:1213 Identity:434/1213 - (35%)
Similarity:586/1213 - (48%) Gaps:299/1213 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 PDSVTILSNVGDKPVLVERKETDDDEEEFDDEENNSVVLRHEIPFTSIYGPSVKFNSFQRKVFIP 229
            |||:       |...||    .|.||.:|..:|......|.  ||.:||  .:|....:|.||:.
 Frog    13 PDSL-------DPGALV----NDIDEVDFSGDEEEDGFPRS--PFLAIY--DMKPLKHERSVFMK 62

  Fly   230 GREIHVRIVDTERSVT-THLLNPNLYTIELTHGPFKWTIKRRYKHFNSLHQQLSFFRTSLN-IPF 292
            |..:..|:.||||... |.:.:..||||.||||||.||||:::|||..||:.|...:..:: :||
 Frog    63 GVPVTARVSDTERYTRGTKVRHSTLYTIILTHGPFTWTIKKKFKHFQELHRDLLRHKLFISFLPF 127

  Fly   293 P--SRSHKEKRTTLKATAREMADESTLKDLPSHTKVKQTSTPLRAEGRSSKIAGSNANNAMAMIS 355
            .  ||.| ..|:.::.|:.||      ..||            .|.|.:|               
 Frog   128 NPLSRFH-VTRSRVETTSSEM------PSLP------------HASGEAS--------------- 158

  Fly   356 PNHSSILAGLTPRRIQKKRKKKKKRKLPRFPNRPESLVTVENLSVRIKQLEDYLYNLLNISLYRS 420
                           |:...||                         ..|.:||..||..|.||:
 Frog   159 ---------------QRMASKK-------------------------AYLNNYLNVLLEKSFYRN 183

  Fly   421 HHETLNFVEVSNVSFVPGMGIKGKEGVILKRTGSTRPGQAGCNFFGCFQKNCCVRCNYFCSDVVC 485
            :|....|::||.:||:..:|.||.||.|.||:|..|  ..|.|.||..|              :|
 Frog   184 YHAMREFLDVSQLSFIADLGPKGLEGFIQKRSGGHR--IQGLNCFGHHQ--------------IC 232

  Fly   486 GTWRNRWFFVKETCFGYIRPTDGSIRAVILFDQGFDVSTGIYQTGMRKGLQVLTNNRHIVLKCWT 550
            ..|..||..||::...|::|..|.|..|:|||.||.:..|...|..:.|:::....|.:.|||..
 Frog   233 YRWSKRWLVVKDSFLLYLKPDTGEISFVLLFDPGFSIDIGKRTTETKYGVKIQNFTRALTLKCNG 297

  Fly   551 RRKCKEWMQYLKNTANSYARDFTLPNPHMSFAPMRANTHATWYVDGAQYMSAVADGLEAALEEIY 615
            .|:...|.|.::..|..:.:||...:....|||:|..|...|:|:|:.|.:||||.|..|.|||:
 Frog   298 YRQASWWGQQIRRLAEDHGKDFLSLHRFDCFAPVREKTQVKWFVNGSTYFAAVADALMQAQEEIF 362

  Fly   616 IADWWLSPEIYMKRPALDGDYWRLDKILLRKAEQGVRVFVLLYKEVEMALGINSYYSKSTL-AKH 679
            |.|||||||:::||||...| ||||.||.||||.||||.|||:|||:|||||||.|||..| ..|
 Frog   363 ITDWWLSPEVHLKRPAHTDD-WRLDIILKRKAEAGVRVCVLLFKEVQMALGINSDYSKRVLMLLH 426

  Fly   680 ENIKVMRHPDHARGGILLWAHHEKIVVIDQTYAFMGGIDLCYGRWDDHHHRLTDLGSISTSSFSG 744
            .||||||||||....:.|||||||:|.|||:..|:||:||.|||||||.:||||:|.:.      
 Frog   427 PNIKVMRHPDHVSSVVFLWAHHEKMVAIDQSVVFLGGLDLAYGRWDDHEYRLTDVGPME------ 485

  Fly   745 STRRTPSLYFTKDDTDSAFGSRKSSRNAHYDTSAKERPPSPPPDEPNTSIELKTLKPGDRLLIPS 809
                                .::.||:...|.:..|...||                        
 Frog   486 --------------------QQQQSRSMEGDITMNEVEQSP------------------------ 506

  Fly   810 TLVSSPGETPAESGIALEGMKLNTPEMERKNVLDRLKNNAMKGARMGKDFMHRLTATETEEKSAE 874
                                          ||                                 
 Frog   507 ------------------------------NV--------------------------------- 508

  Fly   875 VYTIESEEATDHEVNLNMASGGQEVAITTSSTQILSEFCGQAKYWFGKDYSNFILKDWMNLNSPF 939
                                                     .:||.||||||.|.|||:.|:.||
 Frog   509 -----------------------------------------TQYWLGKDYSNSIYKDWVQLDKPF 532

  Fly   940 VDIIDRTTTPRMPWHDVGLCVVGTSARDVARHFIQRWNAMKLEKLRDNTRFPYLMPKSYHQVRLN 1004
            .|.|||...|||||.|||..|.|.:||||:||||||||..|..|.:..| :|||:|||....   
 Frog   533 EDFIDRMKNPRMPWRDVGAVVHGKAARDVSRHFIQRWNYTKTMKYKAAT-YPYLLPKSLSTA--- 593

  Fly  1005 PNIQQNRQ-------QRVTCQLLRSVSAWSCGFIEADLVEQSIHDAYIQTITKAQHYVYIENQFF 1062
                 :||       .....|:||||..||.|     ..|.||.:||:..|..:|||||:|||||
 Frog   594 -----DRQHYTVPGCHTAAVQVLRSVDWWSAG-----CTEYSILNAYLDCIENSQHYVYLENQFF 648

  Fly  1063 ITMQLGMGVPGAYNNVRNQIGETLFKRIVRAHKERKPFRVYVIMPLLPGFEGDVGGSTGIAVRAI 1127
            ||...|       ..:.|.||:.:.|||.:||..:..|||::::||||||:|::....|.:::||
 Frog   649 ITCADG-------RTIFNNIGDAIVKRIQQAHSAKANFRVFIVIPLLPGFQGNIEVGGGYSIQAI 706

  Fly  1128 THWNYASISRGRTSILTRLQEAGIANPENYISFHSLRNHSFL-NNTPITELIYVHSKLLIADDRV 1191
            .|:.|::|.||..||::||:|....:...|:|...||.|..: :.:.:|||:|:|||:||.|||.
 Frog   707 LHYTYSTICRGDNSIISRLKETMGEDWTKYLSVCGLRTHGDMPDGSLVTELVYIHSKMLIVDDRR 771

  Fly  1192 VICGSANINDRSMIGKRDSEIAAILMDEEFEDGRMNGKKYPSGVFAGRLRKYLFKEHLGLLESEG 1256
            ||.||||||||||:|.||||:|.::.|.||....|:|:.|.:|.||..||...|...||...|  
 Frog   772 VIIGSANINDRSMLGSRDSELAVLVEDMEFVSSVMDGEPYQAGKFALSLRMDCFNTILGARAS-- 834

  Fly  1257 SSRSDLDINDPVCEKFWHGTWRRISMQNTEIYDEVFKCIPTDFVKTFASLRKYQEEPPLAKTAPD 1321
               ..:|::|||.:.|::..|::.:..||.:||::|:|:|.|.|.:..:|::|.....||...|.
 Frog   835 ---PHIDVSDPVTDHFFNEVWKQTAFNNTYVYDQMFRCLPADAVTSNRTLQEYTAVKNLAALNPG 896

  Fly  1322 LAANRANDIQGYLVDLPLEFLNKEVLTPPGTSKEGLIPTSVWT 1364
            ||..:...|:|:||:.||:||:.|.|.||.:||||||.:.|||
 Frog   897 LAREQLTGIRGHLVECPLQFLSGENLLPPLSSKEGLISSQVWT 939

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PldNP_001137610.1 PX_PLD 230..431 CDD:132805 54/204 (26%)
PH_PLD 419..564 CDD:269956 48/144 (33%)
PLDc_vPLD1_2_yPLD_like_1 590..734 CDD:197236 94/144 (65%)
PLDc_vPLD1_2_yPLD_like_2 1032..1220 CDD:197239 86/188 (46%)
pld2XP_031753569.1 PLN02866 88..938 CDD:215467 403/1120 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 214 1.000 Domainoid score I2693
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 685 1.000 Inparanoid score I694
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330134at33208
OrthoFinder 1 1.000 - - FOG0001475
OrthoInspector 1 1.000 - - otm48541
Panther 1 1.100 - - O PTHR18896
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1041
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.160

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