DRSC/TRiP Functional Genomics Resources

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Protein Alignment tomboy40 and si:dkey-71l1.1

DIOPT Version :9

Sequence 1:NP_610213.1 Gene:tomboy40 / 35553 FlyBaseID:FBgn0033074 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001107910.1 Gene:si:dkey-71l1.1 / 569883 ZFINID:ZDB-GENE-070705-489 Length:318 Species:Danio rerio


Alignment Length:317 Identity:118/317 - (37%)
Similarity:185/317 - (58%) Gaps:3/317 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LRLPEAPQYSGGVPPQMVEALKAEAKKPELTNPGTLEELHSRCRDIQANTFEGAKIMVNKGLSNH 88
            |.|...|.......||.....:.:.:...|.|||:.:.||..|:|:..:..||.|:::||.||:.
Zfish     5 LALSTRPGRQNSPFPQDRPLSRWDRRDGRLPNPGSFDGLHRNCKDVFPHQIEGVKLVINKTLSSF 69

  Fly    89 FQVTHTINMNSAGPSGYRFGATYVGTKQYGPTEAFPVLLGEIDPMGNLNANVIHQLTSRLRCKFA 153
            |:|:||.::::..||.|||.|.::.:.........|:|:||:|..|:|||:.:..|:.::|.|..
Zfish    70 FKVSHTFHLSAVAPSSYRFHAEHLQSDTDSKETDSPMLIGEMDSSGSLNAHSLFHLSEKIRAKAI 134

  Fly   154 SQFQDSKLVGTQLTGDYRGRDYTLTLTMGNPGFFTSSGVFVCQYLQSVTKRLALGSEFAYHYGPN 218
            .|.|.::.|..|...:|||.|:|..:||.||.....|.:.|..:||||:.:|.||.|..||.|..
Zfish   135 FQTQQAQFVTWQFETEYRGSDFTAAVTMANPDVLRESVIMVAHFLQSVSPQLVLGGELVYHRGRA 199

  Fly   219 VPGRQVAVLSAVGRYAFGDTVWSCTLGPAGFHLSYYQKASDQLQIGVEVETNIRQQESTATVAYQ 283
            ..|   .:|:..|:|:..:.:.:...|..|.|.|||.:|:.|:|:|||.|.:.|.||:|.:..||
Zfish   200 EEG---GILTLAGQYSGANWIATLNAGKGGAHASYYHRANKQIQVGVEFEASTRTQETTFSFGYQ 261

  Fly   284 IDLPKADLVFRGSLDSNWLISGVLEKRLQPLPFSLAISGRMNHQKNSFRLGCGLMIG 340
            ::||:|.:||||.|||..:|.|||||||.|||.:|.:...:||:.:..::|.|:.:|
Zfish   262 MELPEAKMVFRGMLDSRCIIGGVLEKRLYPLPATLIMGAFVNHRADKLQVGLGVNVG 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tomboy40NP_610213.1 Porin3_Tom40 53..340 CDD:132766 112/286 (39%)
si:dkey-71l1.1NP_001107910.1 Porin3_Tom40 34..318 CDD:132766 112/286 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1346842at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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