DRSC/TRiP Functional Genomics Resources

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Protein Alignment tomboy40 and CG4520

DIOPT Version :9

Sequence 1:NP_610213.1 Gene:tomboy40 / 35553 FlyBaseID:FBgn0033074 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001287340.1 Gene:CG4520 / 41902 FlyBaseID:FBgn0038355 Length:320 Species:Drosophila melanogaster


Alignment Length:298 Identity:70/298 - (23%)
Similarity:121/298 - (40%) Gaps:11/298 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PQMVEALKAEAKKPELTNPGTLEELHSRCRDIQANTFEGAKIMVNKGLSNHFQVTHTINMNSAGP 102
            |...|.:.....|   .|||.::.||.....:....::|.::.....|:.:..:|....::...|
  Fly    19 PDCFERVSGHCNK---KNPGNVQNLHILAHRVMPKFYDGIELDYLHRLAPNKYITAAWVLSHIRP 80

  Fly   103 SGYRFGATYVGTKQYGPTEAFPVLLGEIDPMG-NLNANVIHQLTSRLRCKFASQFQDSKLVGTQL 166
            ||:|||..|....| ..|...|.::|:|.|.. ..|.|:::.....||.:...|......|.:|.
  Fly    81 SGFRFGGLYTFRVQ-DDTMYTPTIMGDIHPTSLAANLNILYYPFQSLRMEAVLQKAREAAVESQY 144

  Fly   167 TGDYRGRDYTLTLTMGNPGFFTSSGVFVCQYLQSVTKRLALGSEFAYHYGPNVPGRQVAVLSAVG 231
            |.::.....|.|....|  ....||......::||:...|||.|....:  |.|.:....|:...
  Fly   145 TIEWTRPCDTWTANFYN--VRNESGRCTMSVMRSVSAHWALGGELLLEW--NDPQKLTPDLALAA 205

  Fly   232 RYAFGDTVWSCTLGPAGFHLSYYQKASDQLQIGVEVETNIRQQESTATVAYQIDLPKADLVFRGS 296
            ||:..:...:.|....|..::|:|:....:|:...:..|...:::.||:.||.:...:  ...|.
  Fly   206 RYSHYNYSLAATASRQGLDVTYWQRIHPHIQMANLLAWNRNTRKTIATICYQWNFWNS--AVHGM 268

  Fly   297 LDSNWLISGVLEKRLQPLPFSLAISGRMNHQKNSFRLG 334
            .||:..:..:..|.|..||..:..|..||...:.|..|
  Fly   269 FDSDASVGFMWTKYLTHLPLQMGFSVVMNLPTDRFAFG 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tomboy40NP_610213.1 Porin3_Tom40 53..340 CDD:132766 67/283 (24%)
CG4520NP_001287340.1 Porin3_Tom40 33..312 CDD:132766 67/281 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463705
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3296
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1946
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1346842at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.800

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