DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tomboy40 and tomm40l

DIOPT Version :9

Sequence 1:NP_610213.1 Gene:tomboy40 / 35553 FlyBaseID:FBgn0033074 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_998124.1 Gene:tomm40l / 405895 ZFINID:ZDB-GENE-040426-2319 Length:338 Species:Danio rerio


Alignment Length:348 Identity:164/348 - (47%)
Similarity:226/348 - (64%) Gaps:18/348 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVMASTADAESSRGRGHLSAGLRLPEAPQYSGGVPPQMVEALKAEAK--------KPELTNPG 57
            ||:|:|::|.:....|.|  :.|| :...|.::  :||  |..:.|.:.        :|.|.|||
Zfish     1 MGSVLAASAPSPPPPGPG--APGL-VSVPPGFT--MPP--VSPVSAPSSSPTGQQDTEPPLPNPG 58

  Fly    58 TLEELHSRCRDIQANTFEGAKIMVNKGLSNHFQVTHTINMNSAGPSGYRFGATYVGTKQYGPTEA 122
            ..||.|.:|:::.....||.::.|||||||||||.||:.:::...|.||||||||||||.||.||
Zfish    59 GFEECHRKCKEVFPVQMEGVRLTVNKGLSNHFQVNHTVLLSTQADSSYRFGATYVGTKQTGPGEA 123

  Fly   123 FPVLLGEIDPMGNLNANVIHQLTSRLRCKFASQFQDSKLVGTQLTGDYRGRDYTLTLTMGNPGFF 187
            |||::|::|..|:|||.||||:|.::|.||..|.|..|.|..|...:::|.|:|..:|.|||...
Zfish   124 FPVMVGDMDNTGSLNAQVIHQITDKVRSKFVFQTQQQKFVNWQGDTEFKGEDFTAAVTFGNPDVL 188

  Fly   188 TSSGVFVCQYLQSVTKRLALGSEFAYHYGPNVPGRQVAVLSAVGRYAFGDTVWSCTLGPAGFHLS 252
            ..||:.|..||||||..||||.|..||   ..||.:..|:|..|||...:.:.:.|||.||.|.|
Zfish   189 MGSGIVVAHYLQSVTSSLALGGELVYH---RRPGEEGTVMSLAGRYTGSNFIATLTLGGAGVHAS 250

  Fly   253 YYQKASDQLQIGVEVETNIRQQESTATVAYQIDLPKADLVFRGSLDSNWLISGVLEKRLQPLPFS 317
            ||.||:||||:|||.|.:.|.|:::.|..||:|:|||:|||:|||||||::...|||:|||||.|
Zfish   251 YYHKANDQLQVGVEYEVSTRMQDTSVTFGYQLDVPKANLVFKGSLDSNWVVGANLEKKLQPLPLS 315

  Fly   318 LAISGRMNHQKNSFRLGCGLMIG 340
            ||:|..::|:|:.|:.|.|:.||
Zfish   316 LALSAYLDHRKHKFQCGFGITIG 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tomboy40NP_610213.1 Porin3_Tom40 53..340 CDD:132766 147/286 (51%)
tomm40lNP_998124.1 Porin3_Tom40 54..338 CDD:132766 147/286 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591968
Domainoid 1 1.000 313 1.000 Domainoid score I1271
eggNOG 1 0.900 - - E1_KOG3296
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 330 1.000 Inparanoid score I2430
OMA 1 1.010 - - QHG55758
OrthoDB 1 1.010 - - D1346842at2759
OrthoFinder 1 1.000 - - FOG0001620
OrthoInspector 1 1.000 - - mtm6454
orthoMCL 1 0.900 - - OOG6_101593
Panther 1 1.100 - - O PTHR10802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1729
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

Return to query results.
Submit another query.