DRSC/TRiP Functional Genomics Resources

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Protein Alignment tomboy40 and tomm40

DIOPT Version :9

Sequence 1:NP_610213.1 Gene:tomboy40 / 35553 FlyBaseID:FBgn0033074 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_012812104.1 Gene:tomm40 / 394730 XenbaseID:XB-GENE-995150 Length:352 Species:Xenopus tropicalis


Alignment Length:349 Identity:169/349 - (48%)
Similarity:224/349 - (64%) Gaps:22/349 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVMASTADAESSRGRGHLSAGLRLPEAPQYSGGVPPQM----VEAL-----KAEAKKPELTNP 56
            ||||:|:::.|..:.|.         |.||... .|||..    |..|     |.|.::..|.||
 Frog    17 MGNVLAASSPAPPAAGS---------PPAPGLV-SVPPGFTMPPVAGLTPTPDKNETQEDRLPNP 71

  Fly    57 GTLEELHSRCRDIQANTFEGAKIMVNKGLSNHFQVTHTINMNSAGPSGYRFGATYVGTKQYGPTE 121
            ||.||.|.:|:::.....||.|:.|||||||:|||.|||:::..|.|.|.||||||||||.||.|
 Frog    72 GTFEECHRKCKELFPIQMEGVKLTVNKGLSNYFQVNHTISLSMIGESNYHFGATYVGTKQLGPAE 136

  Fly   122 AFPVLLGEIDPMGNLNANVIHQLTSRLRCKFASQFQDSKLVGTQLTGDYRGRDYTLTLTMGNPGF 186
            |||||:|::|..|:|||.:|||:||.:|.|.|.|.|.||.|..||..:|||.|:|..:|:|||..
 Frog   137 AFPVLVGDLDNSGSLNAQIIHQVTSNVRSKIALQTQQSKFVNWQLDTEYRGEDFTAAVTLGNPDI 201

  Fly   187 FTSSGVFVCQYLQSVTKRLALGSEFAYHYGPNVPGRQVAVLSAVGRYAFGDTVWSCTLGPAGFHL 251
            ...||:.|..||||:|..||||.|..||   ..||.:..|:|..|||:..:...:.|||.||.|.
 Frog   202 LVGSGILVAHYLQSITPSLALGGELVYH---RRPGEEGTVMSLAGRYSAPNWTATLTLGQAGAHA 263

  Fly   252 SYYQKASDQLQIGVEVETNIRQQESTATVAYQIDLPKADLVFRGSLDSNWLISGVLEKRLQPLPF 316
            :||.||:||||:|||.|.:.|.|:::.:..||:|||||:|:|:||:||||::...|||:|.|||.
 Frog   264 TYYHKANDQLQVGVEFEASTRMQDTSVSFGYQLDLPKANLLFKGSVDSNWIVGATLEKKLPPLPL 328

  Fly   317 SLAISGRMNHQKNSFRLGCGLMIG 340
            :||:...:||:||.|:.|.||.||
 Frog   329 TLAMGAFLNHKKNKFQCGFGLTIG 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tomboy40NP_610213.1 Porin3_Tom40 53..340 CDD:132766 150/286 (52%)
tomm40XP_012812104.1 Porin3_Tom40 68..352 CDD:132766 150/286 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 319 1.000 Domainoid score I1243
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H101105
Inparanoid 1 1.050 341 1.000 Inparanoid score I2297
OMA 1 1.010 - - QHG55758
OrthoDB 1 1.010 - - D1346842at2759
OrthoFinder 1 1.000 - - FOG0001620
OrthoInspector 1 1.000 - - mtm9447
Panther 1 1.100 - - O PTHR10802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1729
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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