DRSC/TRiP Functional Genomics Resources

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Protein Alignment tomboy40 and tomm40

DIOPT Version :9

Sequence 1:NP_610213.1 Gene:tomboy40 / 35553 FlyBaseID:FBgn0033074 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_017206807.1 Gene:tomm40 / 322645 ZFINID:ZDB-GENE-030131-1365 Length:360 Species:Danio rerio


Alignment Length:347 Identity:167/347 - (48%)
Similarity:225/347 - (64%) Gaps:10/347 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVM-ASTADAESSRGRGHLSAGLRLPEAP-----QYSGGVPPQM-VEALKAEAKKPELTNPGT 58
            ||:|: ||:.:...:.|.|...||..|...|     ....||||.. .:.......:..|.||||
Zfish    17 MGSVLAASSPNPPPASGGGTAPAGAGLVTVPPGFTMPPVSGVPPSSGTQGQPGTDSESSLPNPGT 81

  Fly    59 LEELHSRCRDIQANTFEGAKIMVNKGLSNHFQVTHTINMNSAGPSGYRFGATYVGTKQYGPTEAF 123
            .||.|.:|:::.....||.:::|||||||||||:|||.:::.|.||||||:||||:||.||.|:|
Zfish    82 FEECHRKCKEVFPVQMEGVRLVVNKGLSNHFQVSHTITLSTLGDSGYRFGSTYVGSKQTGPAESF 146

  Fly   124 PVLLGEIDPMGNLNANVIHQLTSRLRCKFASQFQDSKLVGTQLTGDYRGRDYTLTLTMGNPGFFT 188
            ||::|::|..|:|||.||||||:|:|.|.|.|.|..|.|..|..|:|||.|:|..:|:|||....
Zfish   147 PVMVGDMDNTGSLNAQVIHQLTNRVRSKIAIQTQQHKFVNWQCDGEYRGDDFTAAVTLGNPDVLV 211

  Fly   189 SSGVFVCQYLQSVTKRLALGSEFAYHYGPNVPGRQVAVLSAVGRYAFGDTVWSCTLGPAGFHLSY 253
            .||:.|..||||::..|.||.|..||   ..||.:..|.|.||||...:.|.:.|:|.||.|.||
Zfish   212 GSGILVAHYLQSLSPSLVLGGELVYH---KRPGEEGTVTSLVGRYTGSNYVATLTVGGAGAHASY 273

  Fly   254 YQKASDQLQIGVEVETNIRQQESTATVAYQIDLPKADLVFRGSLDSNWLISGVLEKRLQPLPFSL 318
            |.||:||||:|||.|.:.|.||::.:..||:|:|||:|:|:|||||||::...|||:|.|||.||
Zfish   274 YHKANDQLQVGVEFEASTRMQETSVSFGYQLDVPKANLLFKGSLDSNWVVGATLEKKLLPLPLSL 338

  Fly   319 AISGRMNHQKNSFRLGCGLMIG 340
            |:...:||:||.|:.|.|:.||
Zfish   339 ALGAFLNHRKNKFQCGFGVTIG 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tomboy40NP_610213.1 Porin3_Tom40 53..340 CDD:132766 150/286 (52%)
tomm40XP_017206807.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591966
Domainoid 1 1.000 313 1.000 Domainoid score I1271
eggNOG 1 0.900 - - E1_KOG3296
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H101105
Inparanoid 1 1.050 330 1.000 Inparanoid score I2430
OMA 1 1.010 - - QHG55758
OrthoDB 1 1.010 - - D1346842at2759
OrthoFinder 1 1.000 - - FOG0001620
OrthoInspector 1 1.000 - - mtm6454
orthoMCL 1 0.900 - - OOG6_101593
Panther 1 1.100 - - O PTHR10802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1729
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.770

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