DRSC/TRiP Functional Genomics Resources

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Protein Alignment tomboy40 and tomm40l

DIOPT Version :9

Sequence 1:NP_610213.1 Gene:tomboy40 / 35553 FlyBaseID:FBgn0033074 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_031746850.1 Gene:tomm40l / 100496551 XenbaseID:XB-GENE-958939 Length:307 Species:Xenopus tropicalis


Alignment Length:340 Identity:135/340 - (39%)
Similarity:198/340 - (58%) Gaps:33/340 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVMASTADAESSRGRGHLSAGLRLPEAPQYSGGVPPQMVEALKAEAKKPELTNPGTLEELHSR 65
            ||||:|                   :..:|.|           .:...|:..|.|||:.:|||..
 Frog     1 MGNVVA-------------------MATSPPY-----------WRKHKKRVPLPNPGSFDELHRS 35

  Fly    66 CRDIQANTFEGAKIMVNKGLSNHFQVTHTINMNSAGPSGYRFGATYVGTKQYGPTEAFPVLLGEI 130
            |:::.....||.|:::||.||:||||:|:|:|::.|.|.|.|.|.|||..|..|||.||:|.|::
 Frog    36 CKEVFPQQMEGVKLIINKPLSSHFQVSHSIHMSTVGQSSYHFNAKYVGDYQPSPTETFPMLTGDV 100

  Fly   131 DPMGNLNANVIHQLTSRLRCKFASQFQDSKLVGTQLTGDYRGRDYTLTLTMGNPGFFTSSGVFVC 195
            |..|:|||.:...|..|.|.|...|...||.:..|:.|:|||.|.|:|||:|||.....|.:.|.
 Frog   101 DNAGSLNAQIHCLLADRFRSKAVFQTYRSKFLTWQVDGEYRGDDCTVTLTLGNPDILNESVILVT 165

  Fly   196 QYLQSVTKRLALGSEFAYHYGPNVPGRQVAVLSAVGRYAFGDTVWSCTLGPAGFHLSYYQKASDQ 260
            .:|||:|.||.||.|..||   ...|.:.|:.:..|:|:..:.|.:..:|..|.|.|||.:|::|
 Frog   166 HFLQSITPRLVLGGELVYH---QRMGEEGAIFTMAGKYSAPNWVATLNIGYGGAHASYYHRANEQ 227

  Fly   261 LQIGVEVETNIRQQESTATVAYQIDLPKADLVFRGSLDSNWLISGVLEKRLQPLPFSLAISGRMN 325
            :.:|||:|.|.|.||::....|.:|:|||::||:||:|::|.:.|:|||:|.|||.:||:...||
 Frog   228 IHVGVELEANTRLQETSFAFGYHLDIPKANVVFKGSVDNSWCVGGILEKKLPPLPVTLALGAFMN 292

  Fly   326 HQKNSFRLGCGLMIG 340
            |.||.|..|..:|:|
 Frog   293 HWKNKFHCGFNIMVG 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tomboy40NP_610213.1 Porin3_Tom40 53..340 CDD:132766 126/286 (44%)
tomm40lXP_031746850.1 Porin3_Tom40 23..307 CDD:132766 126/286 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 319 1.000 Domainoid score I1243
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 341 1.000 Inparanoid score I2297
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1346842at2759
OrthoFinder 1 1.000 - - FOG0001620
OrthoInspector 1 1.000 - - mtm9447
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1729
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.060

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