DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bin3 and Mepce

DIOPT Version :9

Sequence 1:NP_001260724.1 Gene:bin3 / 35552 FlyBaseID:FBgn0263144 Length:1367 Species:Drosophila melanogaster
Sequence 2:NP_001094148.1 Gene:Mepce / 304361 RGDID:1560550 Length:660 Species:Rattus norvegicus


Alignment Length:981 Identity:236/981 - (24%)
Similarity:353/981 - (35%) Gaps:366/981 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 GGGGG--AGAHHAAAGGHHHHHNTR----LAQNAAAGGASGGG-TIQMHKKMLRGHHHHVLCAGN 217
            |||||  ..:|..||.|.......|    .|.:|.|..:.||| ..|.|     |..|....|..
  Rat    25 GGGGGPEVRSHQEAASGELLDGTERGPGPRAHSAGATASGGGGPQAQTH-----GEPHGRAAAPA 84

  Fly   218 NANHTCCLVTGCNGSSIGGVGVA----GSGGATASAGGGGASCKEAQSCKDTSSLSGNSSIAGSA 278
            :....   ..|..|:.:|.....    |........||||   |...||          ::.|.:
  Rat    85 DVGEE---RRGGGGTDLGPPAPPRPRNGYQPHRPPVGGGG---KRRNSC----------NVGGGS 133

  Fly   279 GAGNAVHYCCGRSKFFLPEKRLRKEV-----IVPPTKFLLGGNISDPLNLNSLQNENTSNASSTN 338
            | |:..|          |..:.|:.|     .|.|:.|||||||.||||||||.:|..|.|.:  
  Rat   134 G-GSFKH----------PAFKRRRRVNSDCDSVLPSNFLLGGNIFDPLNLNSLLDEEVSRALN-- 185

  Fly   339 NTPATTPRQSPITTPPK----VEVIIPPNIHDPLHLLDPVDSMEYEKQLTSPMKRAGPGGGMLHH 399
               |.||:.||:  |.|    ||::||.:|.|||.|....|  |....|.||:|        :..
  Rat   186 ---AETPKSSPL--PAKGRDPVEILIPKDITDPLSLNTCTD--EAHVVLASPLK--------IGR 235

  Fly   400 RQHHYRTRKNRKRRRFDSNNTSHAGDEGGVGSELTDEPPLPAATSSLAASPVAAPLNVGGSLLLS 464
            ::|.:|...:::::....|::.         :.|..:|..|               :|.|.    
  Rat   236 KRHRHRGPHHQQQQASGGNDSQ---------AVLPTDPLTP---------------SVHGE---- 272

  Fly   465 ESAAPAPGETAE-MGQQQEQAHVHSPQSASTTTTAAEMPTPTPTSAAAATATAEHKEQSAPAPTA 528
                   |.|.: .||.::....:...:|.........|.|:....::.:.:|........||::
  Rat   273 -------GATQQHRGQNRDDPQPYELNTAINCRDEVVSPLPSALQGSSGSLSAPPAASVTSAPSS 330

  Fly   529 TSSPQRQQQHVAAAAEELPTPETSAAAETPAEEMLLSCSATSASLVASTLAERRASRDLRLDLSS 593
            :||..|:::            .||:.:|..|.                                 
  Rat   331 SSSRHRKRR------------RTSSKSEAGAR--------------------------------- 350

  Fly   594 TCYGVGGTGLSFGGSISSSVGSSFGGGGRKRKISESSTSQKSKKFHRHDAMDKIVSPVVPQPGAW 658
                        |||..|.......||||                |.|                 
  Rat   351 ------------GGSQGSKEKGRGSGGGR----------------HHH----------------- 370

  Fly   659 KRPPRILQPSGARKPSTRRSTSVSESELLSPVEEQPPKQLPLIGVEIPRDDTPDLPDHGLGSPLS 723
                                                                          ||.
  Rat   371 --------------------------------------------------------------PLP 373

  Fly   724 TTSGATSHTAGEQDSLAGVDISMGDTLGSGVVGKAPLTSSLMLEPAKIPPIKMLPKFRADGLKYR 788
            .|.                                                     |:...||::
  Rat   374 ATG-----------------------------------------------------FKKQQLKFQ 385

  Fly   789 YGNFDRYVDFRQMNEFRDVRLQVFQRHVELFENKDILDIGCNVGHMTITVARHLAPKTIVGIDID 853
            |||:.:|..:|..: ..|:||:|.:  .|.|:.:|:||:||||||:|:::|....|..:||:|||
  Rat   386 YGNYCKYYGYRNPS-CEDMRLRVLK--PEWFQGRDVLDLGCNVGHLTLSIACKWGPARMVGLDID 447

  Fly   854 RELVARARRNLSIFVRIPKEEKLLEVKAEPTVDAKANIAVKDETSGAAHKKTRRGKRRRKVHQGI 918
            ..|:..||:|:..::   .||..|:.                        :|..|....:..:| 
  Rat   448 PRLIHSARQNIRHYL---SEELRLQA------------------------QTSEGDPGTEGEEG- 484

  Fly   919 HHHHHHHHDLEQLQQQQKLNSLLVKPHEFFPISFPLTYGRIPRILSSSKSPNMLGNKNQFPANVF 983
                                :..|:....||.|  ||..|.|  :::...|....:.:.||.||.
  Rat   485 --------------------TTTVRKRSCFPAS--LTASRGP--IAAPHLPLDGADTSVFPNNVV 525

  Fly   984 FRHTNYVLKDESLMASDTQQYDLILCLSVTKWIHLNFGDNGLKMAFKRMFNQLRPGGKLILEAQN 1048
            |...||||..:.|:.:...:||::||.|:|||:|||:||.|||..|:|::..|||||.|:||.|.
  Rat   526 FVTGNYVLDRDELVDAQRPEYDVVLCFSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQP 590

  Fly  1049 WASYKKKKNLTPEIYNNYKQIEFFPNKFHEYLLSSEVGFSHSYTLGVPRHMNKGFCRPIQLYAKG 1113
            |:||.::|:||..||.||.:|:..|.:|..||.|.|||||....:..|.:.::||.||:.|:.|.
  Rat   591 WSSYCRRKSLTETIYKNYFRIQLKPEQFSSYLTSPEVGFSSYELVATPSNTSRGFQRPVYLFHKA 655

  Fly  1114 DYTPNH 1119
             .:|:|
  Rat   656 -RSPSH 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bin3NP_001260724.1 Methyltransf_18 820..>867 CDD:289607 21/46 (46%)
Bin3 1004..1112 CDD:284317 54/107 (50%)
MepceNP_001094148.1 AdoMet_MTases 417..587 CDD:100107 70/221 (32%)
Bin3 546..654 CDD:284317 54/107 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347743
Domainoid 1 1.000 128 1.000 Domainoid score I5192
eggNOG 1 0.900 - - E1_KOG2899
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 259 1.000 Inparanoid score I3059
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1185441at2759
OrthoFinder 1 1.000 - - FOG0003359
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103556
Panther 1 1.100 - - LDO PTHR12315
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2246
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.800

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