DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30431 and zgc:113294

DIOPT Version :9

Sequence 1:NP_610211.1 Gene:CG30431 / 35549 FlyBaseID:FBgn0050431 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001013567.1 Gene:zgc:113294 / 541422 ZFINID:ZDB-GENE-050320-124 Length:332 Species:Danio rerio


Alignment Length:288 Identity:81/288 - (28%)
Similarity:129/288 - (44%) Gaps:47/288 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 VPLQASKPVAHVAPLMETVDFESLDFQDSSHSEHDIPSYWESSVDSGSLNTPHHQPETAELFAVE 184
            :.::.:.||.|     |.::...:.::|......|:....|...|...:.......|..:.    
Zfish    11 IKIEETFPVKH-----EEIEEFIIKYEDPEEQTEDLIPPKEEGQDQNEMEENDQYEEYCDF---- 66

  Fly   185 PPTPPESSEEPAPDAAEKPKMRRARPRQDNVKPKE--RKASGAVHPRSLHPCPECEKKFTRNFQL 247
              ||.|.||                  |.|...:|  |||..       :.|.:|.:.|||...|
Zfish    67 --TPEEDSE------------------QTNASSEETARKAKS-------NTCHQCGRSFTRKQYL 104

  Fly   248 KLHMTAVHGMGEMRYQCEECRKNFASRHSLRYHVKSVHSTERPFGCQHCDRRFILRTQLLSHLRT 312
            ..||| :|. ||..|.|::|.|:|..:.:|:.|::: |:.|:|:.|..|.:.|.....|..|:..
Zfish   105 IEHMT-IHN-GEKPYTCQQCGKSFTWKQNLKIHMRT-HTDEKPYTCHQCGKSFARNQNLSKHMGV 166

  Fly   313 HTGEAKPRIFECQRCSKSWPTKSDLRTHMRSHNPNMERPFKCDRCSKAFFTRGHLNSHLLVHTGE 377
            |||| ||  :.|:.|.|.:..:.:|..|||.|..  |:|:.|..|.:.|..:.:|..|:.:|||.
Zfish   167 HTGE-KP--YTCECCGKCFTRQQNLTGHMRVHTG--EKPYTCQHCGQNFTWKQNLTGHMSIHTGG 226

  Fly   378 KPFACEYCDKCYQSVGNLNNHMVRLHAD 405
            |..||..|.|.:....||.:|| ::|.:
Zfish   227 KAHACNQCGKSFTRKQNLVDHM-KIHTE 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30431NP_610211.1 zf-AD 11..82 CDD:285071
C2H2 Zn finger 234..255 CDD:275368 9/20 (45%)
C2H2 Zn finger 264..285 CDD:275368 6/20 (30%)
C2H2 Zn finger 293..313 CDD:275368 5/19 (26%)
zf-C2H2_8 305..373 CDD:292531 23/67 (34%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 354..374 CDD:275368 5/19 (26%)
zf-H2C2_2 366..389 CDD:290200 10/22 (45%)
C2H2 Zn finger 382..403 CDD:275368 7/20 (35%)
zgc:113294NP_001013567.1 COG5048 <71..207 CDD:227381 52/168 (31%)
C2H2 Zn finger 91..111 CDD:275368 9/20 (45%)
zf-H2C2_2 103..127 CDD:290200 11/25 (44%)
C2H2 Zn finger 119..139 CDD:275368 6/20 (30%)
zf-H2C2_2 131..156 CDD:290200 8/25 (32%)
C2H2 Zn finger 147..167 CDD:275368 5/19 (26%)
zf-H2C2_2 159..184 CDD:290200 11/27 (41%)
C2H2 Zn finger 175..195 CDD:275368 7/19 (37%)
zf-H2C2_2 187..211 CDD:290200 9/25 (36%)
C2H2 Zn finger 203..223 CDD:275368 5/19 (26%)
C2H2 Zn finger 231..251 CDD:275368 7/20 (35%)
COG5048 259..>318 CDD:227381
C2H2 Zn finger 259..279 CDD:275368
zf-H2C2_2 272..296 CDD:290200
C2H2 Zn finger 287..307 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.