DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30431 and Sry-delta

DIOPT Version :10

Sequence 1:NP_610211.1 Gene:CG30431 / 35549 FlyBaseID:FBgn0050431 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster


Alignment Length:351 Identity:70/351 - (19%)
Similarity:127/351 - (36%) Gaps:64/351 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 ALALDDVLECLEREVGSLEGPMSVPLQASKPVAHVAP--LMETVDFESLDFQDSSHSEHDIPSYW 159
            :|.|..:..|::.::.            .||.|.:.|  ..|..|:::: ..:...::..:.:..
  Fly    38 SLVLTHLANCIQTQLD------------LKPGARLCPRCFQELSDYDTI-MVNLMTTQKRLTTQL 89

  Fly   160 ESSVDSGSLNTPHHQPETAELFAVEPPTPPESSEEPAPDA------------AEKPKMRRARPRQ 212
            :     |:|.:....||:.|...||....|:|..|...||            .|:......|...
  Fly    90 K-----GALKSEFEVPESGEDILVEEVEIPQSDVETDADAEADALFVELVKDQEESDTEIKREFV 149

  Fly   213 DNVKPKE----------------------RKASGAVHP---RSLHPCPECEKKFTRNFQLKLHMT 252
            |..:.::                      :.:.|...|   |....|..|.|.:...:||:.|::
  Fly   150 DEEEEEDDDDDDEFICEDVDVGDSEALYGKSSDGEDRPTKKRVKQECTTCGKVYNSWYQLQKHIS 214

  Fly   253 AVHGMGEMRYQCEECRKNFASRHSLRYHVKSVHSTERPFGCQHCDRRFILRTQLLSHLRTHTGEA 317
            ..|.. :..:.|..|.........|..|: ::|..:....|::|.:.|......|.|:|.|..:.
  Fly   215 EEHSK-QPNHICPICGVIRRDEEYLELHM-NLHEGKTEKQCRYCPKSFSRPVNTLRHMRMHWDKK 277

  Fly   318 KPRIFECQRCSKSWPTKSDLRTHMRSHNPNMERPFKCDRCSKAFFTRGHLNSHLLVHTGEKP-FA 381
            |   ::|::|...:...:.|..|...|... |.|..|..|:.:|.:|...|.|.|:|...:| ..
  Fly   278 K---YQCEKCGLRFSQDNLLYNHRLRHEAE-ENPIICSICNVSFKSRKTFNHHTLIHKENRPRHY 338

  Fly   382 CEYCDKCYQSVGNLNNHMVRLHADII 407
            |..|.|.:.....|..||.....|::
  Fly   339 CSVCPKSFTERYTLKMHMKTHEGDVV 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30431NP_610211.1 zf-AD 11..82 CDD:214871
KREPA <181..>257 CDD:483960 20/112 (18%)
SFP1 <233..285 CDD:227516 11/51 (22%)
C2H2 Zn finger 234..255 CDD:275368 6/20 (30%)
C2H2 Zn finger 264..285 CDD:275368 4/20 (20%)
C2H2 Zn finger 293..313 CDD:275368 6/19 (32%)
C2H2 Zn finger 324..344 CDD:275368 4/19 (21%)
C2H2 Zn finger 354..374 CDD:275368 7/19 (37%)
zf-H2C2_2 366..389 CDD:463886 8/23 (35%)
C2H2 Zn finger 382..403 CDD:275368 6/20 (30%)
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 39/160 (24%)
C2H2 Zn finger 225..245 CDD:275368 4/20 (20%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
C2H2 Zn finger 281..301 CDD:275368 4/19 (21%)
C2H2 Zn finger 310..327 CDD:275370 5/16 (31%)
C2H2 Zn finger 339..359 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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