DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30431 and CG14710

DIOPT Version :10

Sequence 1:NP_610211.1 Gene:CG30431 / 35549 FlyBaseID:FBgn0050431 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_650092.4 Gene:CG14710 / 41393 FlyBaseID:FBgn0037920 Length:415 Species:Drosophila melanogaster


Alignment Length:415 Identity:103/415 - (24%)
Similarity:171/415 - (41%) Gaps:74/415 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LVCRCCL--LEQPPLYHSLYD-ASSQLAVELKALAPALRLEHGDNLTDVICDLCLRRLHDARDFQ 71
            |.||.||  .|:..:.....| ..|.|..:|: |...:|:.....|.:..|:.|...:....:|:
  Fly     8 LQCRICLGDFEESQMICLFGDKGESDLRKKLE-LCCRIRVRQSPQLPEKACNSCCEFVQMWFNFR 71

  Fly    72 RRCEHSEQVLRMRHEHWKHTVAV-GDALALDDVLECLEREVGSLEGPMSVPLQASKPVAHVA--- 132
            :.|.:|:       .:|:.:.:. .:|||.....|.:.....:|...:....|..:.:..:.   
  Fly    72 QMCLNSQ-------VYWETSSSERPEALAQASDAEYMLYLYENLHLKLGTENQEKEEITAIEEGD 129

  Fly   133 -----PLMETVDF------ESLDFQDSSHSEHD---IPSYWESSV----------DSGSL----- 168
                 ...|.:||      ||::..:..::|..   :.|:.:|.|          |.|.|     
  Fly   130 EQQEDQSQEVLDFNGFIINESIEEDEEPNTESPEQILISHMDSYVDDQQMEELIDDKGELVEELS 194

  Fly   169 --NTPHHQPE--TAELFAVEPPTPPESSEEPAPDAAEKPKMRRARPRQDNVKPK-ERKASGAVHP 228
              || .::.|  ..||.....|:|..|        .:..|.:..|||:.:.:.| :||...|...
  Fly   195 NANT-FYEVEYGDEELLMSSAPSPHPS--------FKMDKQKPGRPRKPDAELKFKRKDINAKER 250

  Fly   229 RSLHPCPECEKKF----TRNFQLKLHMTAVHGMGEMRY---QCEECRKNFASRHSLRYHVKSVHS 286
            .:...|.| |:||    ..|...|..:...|.|....|   |||.|.|:|.....||.|::. |:
  Fly   251 GNQPKCKE-EEKFMCILCGNVFYKKSVFTAHMMTHSEYKPHQCEICNKSFRQMGELRAHIRR-HT 313

  Fly   287 TERPFGCQHCDRRFILRTQLLSHLRTHTGEAKPRIFECQRCSKSWPTKSDLRTHMRSHNPNMERP 351
            .:||:.|.:|||.|..|::.:.|.|.||   ..|.:.||.|.|::...:.|:.|:.||  :.::.
  Fly   314 GDRPYKCMYCDRHFYDRSERVRHERVHT---NTRPYACQECGKTFTHTAILKNHILSH--SAQKN 373

  Fly   352 FKCDRCSKAFFTRGHLNSHL--LVH 374
            :.|..|.|:|.....|.:||  |.|
  Fly   374 YNCGICCKSFTLLHQLKAHLQTLTH 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30431NP_610211.1 zf-AD 11..82 CDD:214871 17/73 (23%)
KREPA <181..>257 CDD:483960 19/80 (24%)
SFP1 <233..285 CDD:227516 19/58 (33%)
C2H2 Zn finger 234..255 CDD:275368 7/24 (29%)
C2H2 Zn finger 264..285 CDD:275368 8/20 (40%)
C2H2 Zn finger 293..313 CDD:275368 8/19 (42%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
C2H2 Zn finger 354..374 CDD:275368 8/21 (38%)
zf-H2C2_2 366..389 CDD:463886 5/11 (45%)
C2H2 Zn finger 382..403 CDD:275368
CG14710NP_650092.4 zf-AD 9..84 CDD:462262 18/82 (22%)
COG5048 <261..395 CDD:227381 45/139 (32%)
C2H2 Zn finger 264..284 CDD:275368 4/19 (21%)
C2H2 Zn finger 292..312 CDD:275368 8/20 (40%)
C2H2 Zn finger 320..340 CDD:275368 8/19 (42%)
C2H2 Zn finger 348..368 CDD:275368 6/19 (32%)
C2H2 Zn finger 376..395 CDD:275368 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.