DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30431 and topi

DIOPT Version :10

Sequence 1:NP_610211.1 Gene:CG30431 / 35549 FlyBaseID:FBgn0050431 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster


Alignment Length:193 Identity:61/193 - (31%)
Similarity:91/193 - (47%) Gaps:23/193 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 LHPCPECEKKFTRNFQLKLHMTAVH-------------GMGEMR-YQCEECRKNFASRHSLRYHV 281
            |.||..|:..|........|....|             |.|.:| |.|:.|.|::.....|..|:
  Fly   466 LLPCDFCDVNFEFAHDFLAHSEEKHLNKKKREKETRNTGAGRIRQYLCDICGKSYTQSSHLWQHL 530

  Fly   282 KSVHSTERPFGCQ--HCDRRFILRTQLLSHLR-THTGEAKPRIFECQRCSKSWPTKSDLRTHMRS 343
            : .|...:||.||  :|||:|.:|..|..|:| .||||   |.:.|..|.|.:.|.|....|...
  Fly   531 R-FHQGVKPFVCQEENCDRKFTIRPDLNDHIRKCHTGE---RPYLCLVCGKRFLTGSVFYQHRLI 591

  Fly   344 HNPNMERPFKCDRCSKAFFTRGHLNSHLLVHTGEKPFACEYCDKCYQSVGNLNNHMVRLHADI 406
            |..  ||.::|:.|.|.|:....|.:|..:||||||::|.:|.|.::..|:.:.|:...|:.:
  Fly   592 HRG--ERRYECEECGKRFYRADALKNHQRIHTGEKPYSCLFCTKTFRQRGDRDKHIRARHSHL 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30431NP_610211.1 zf-AD 11..82 CDD:214871
KREPA <181..>257 CDD:483960 7/38 (18%)
SFP1 <233..285 CDD:227516 15/65 (23%)
C2H2 Zn finger 234..255 CDD:275368 4/20 (20%)
C2H2 Zn finger 264..285 CDD:275368 5/20 (25%)
C2H2 Zn finger 293..313 CDD:275368 10/22 (45%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
C2H2 Zn finger 354..374 CDD:275368 6/19 (32%)
zf-H2C2_2 366..389 CDD:463886 11/22 (50%)
C2H2 Zn finger 382..403 CDD:275368 5/20 (25%)
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275370
C2H2 Zn finger 277..297 CDD:275370
C2H2 Zn finger 431..453 CDD:275368
COG5048 <450..647 CDD:227381 60/186 (32%)
C2H2 Zn finger 469..490 CDD:275368 4/20 (20%)
C2H2 Zn finger 513..564 CDD:275368 18/51 (35%)
C2H2 Zn finger 541..561 CDD:275368 9/19 (47%)
C2H2 Zn finger 572..592 CDD:275368 6/19 (32%)
C2H2 Zn finger 600..620 CDD:275368 6/19 (32%)
zf-H2C2_2 612..637 CDD:463886 11/24 (46%)
C2H2 Zn finger 628..646 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.

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