DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30431 and Neu2

DIOPT Version :10

Sequence 1:NP_610211.1 Gene:CG30431 / 35549 FlyBaseID:FBgn0050431 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster


Alignment Length:420 Identity:105/420 - (25%)
Similarity:157/420 - (37%) Gaps:113/420 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SLYDASSQLAVELKAL---APALRLEHGDNLTDVICDLCLRRLHDARDFQRRCEHSEQVLRMRHE 86
            |::|.|.:..:.:..:   ....::|..|.|::.||..||....:|.|.....|.|.|..|.   
  Fly     3 SVFDESHEPGLSIAYIIYKCTGWQVEKHDPLSNTICKSCLEDAQNAFDIIETYERSHQFYRF--- 64

  Fly    87 HWKHTVAVGDALALDDVLECLEREVGSLEGPMSVPLQASKPVAHVAPLMETVDFESLDFQDSSHS 151
                         |.||.|......||                   ...|.|:....|.||.:  
  Fly    65 -------------LKDVREEESENDGS-------------------GCSEEVEAAERDLQDGA-- 95

  Fly   152 EHDIPSYWESSVDSGSLNTPHHQPETAELFAVEPPTPPESSEEPAPDAAEKPKMRRARPRQDNVK 216
                     ..||||      ::|:..|       ...::.|:|....:..||..:.:   .|:|
  Fly    96 ---------DDVDSG------NEPDINE-------CDIKAKEKPGFSCSHCPKSFQVK---SNLK 135

  Fly   217 PKERKASGAVHPRSLH------PCPECEKKFTRNFQLKLHMTAVHGMGEMRYQCEECRKNFASRH 275
                     ||.|| |      .|..|.|.|..:..|:.|| ..| .||..:||..|.::|.:.|
  Fly   136 ---------VHMRS-HTGERPFTCSLCPKSFGYSSGLQNHM-RTH-TGERPFQCSHCPRSFTAGH 188

  Fly   276 SLRYHVKSVHSTERPFGCQHCDRRFILRTQLLSHLRTHTGEAKPRIFECQRCSKSWPTKSDLRTH 340
            .|:.|:: :|.......|.:|.:.|:....|..||.|||.|.:   |:|.:||||:..:.:|..|
  Fly   189 HLKAHIQ-MHERRGSLRCPYCQKCFLTSLILKQHLATHTDETQ---FKCSQCSKSFQVEHELWMH 249

  Fly   341 MRSHNPNMERPFKCDRCSKAFFTRGHLNSHL-----------------LVHTGEKPFACEYCDKC 388
            ||.|   .||.|.|..|||.|....:|..||                 |.|:  |...|..|.|.
  Fly   250 MRVH---QERLFTCGHCSKDFALHAYLKRHLSRNARCSQSSKASAHKTLGHS--KALKCGKCPKT 309

  Fly   389 YQSVGNLNNHMVRLHA---DIIEAQLEAEG 415
            :.....|:.|: :.|.   .::|...::.|
  Fly   310 FTDRSALSTHL-KSHTKNKPLLEGPCKSSG 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30431NP_610211.1 zf-AD 11..82 CDD:214871 15/59 (25%)
KREPA <181..>257 CDD:483960 19/81 (23%)
SFP1 <233..285 CDD:227516 17/51 (33%)
C2H2 Zn finger 234..255 CDD:275368 7/20 (35%)
C2H2 Zn finger 264..285 CDD:275368 6/20 (30%)
C2H2 Zn finger 293..313 CDD:275368 6/19 (32%)
C2H2 Zn finger 324..344 CDD:275368 9/19 (47%)
C2H2 Zn finger 354..374 CDD:275368 9/36 (25%)
zf-H2C2_2 366..389 CDD:463886 9/39 (23%)
C2H2 Zn finger 382..403 CDD:275368 5/20 (25%)
Neu2NP_649316.1 zf-AD 1..63 CDD:462262 15/59 (25%)
COG5048 <119..241 CDD:227381 43/140 (31%)
C2H2 Zn finger 121..141 CDD:275368 8/32 (25%)
zf-H2C2_2 133..156 CDD:463886 10/32 (31%)
C2H2 Zn finger 149..169 CDD:275368 7/20 (35%)
zf-H2C2_2 162..185 CDD:463886 9/24 (38%)
C2H2 Zn finger 177..197 CDD:275368 6/20 (30%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
zf-C2H2_8 206..286 CDD:464935 31/85 (36%)
C2H2 Zn finger 233..253 CDD:275368 9/19 (47%)
C2H2 Zn finger 260..297 CDD:275368 9/36 (25%)
C2H2 Zn finger 303..323 CDD:275368 5/20 (25%)
C2H2 Zn finger 353..373 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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