DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30431 and Meics

DIOPT Version :10

Sequence 1:NP_610211.1 Gene:CG30431 / 35549 FlyBaseID:FBgn0050431 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster


Alignment Length:507 Identity:119/507 - (23%)
Similarity:182/507 - (35%) Gaps:148/507 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CRCCL-------------LEQPPLYHSLYDASSQLAVELKALAPALRLEHGDNLTDVICDLCLRR 63
            ||.|.             :..||::..           |.::.|.:.....|.:...||..||..
  Fly    21 CRACAEHSSILVDLFSKEISDPPIWEM-----------LNSILPEICRVKRDEMPQKICPTCLVA 74

  Fly    64 LHDARDFQRRCEHSEQVLRMRHEHWKHTVAVGDALALDDVLECLER--------------EVGSL 114
            ..:|..|:.:||.|.|..             ...|.||.....|.|              |:...
  Fly    75 AQNAFHFRHKCEQSFQFF-------------SQLLQLDKSNSNLSRSHCRRGTMNPLIPFEIVGC 126

  Fly   115 EGPMS---VPLQASKPVAHV----------------APLMETVDFESLDFQDSSHSEHDIPSYWE 160
            |.|:.   ..|.|::|....                .||.|..:....|.:  :..|..|...:|
  Fly   127 EDPLDTNVTKLDANRPDVKTDIDEPTDGKATNGQESEPLQEVFEITMNDIK--TEDEVSIQETFE 189

  Fly   161 SSVD-SGSLNTPHHQPETAELFAV-------EPPTP-----------------PESSEEPAPDAA 200
            .:.| ....|....:.|.::.:.|       ||..|                 .|.....:...|
  Fly   190 DAFDEENDNNNTDSEREDSDQWTVGSTEDQDEPWIPGGGGRQTVGGNNQSLLCTECGVSYSTQKA 254

  Fly   201 EKPKMRRARPRQDNVKP------------------KERKASGA------------VHPRSL---- 231
            ....:.:.:.:.|..||                  ..|:.:|.            .|..:|    
  Fly   255 LARHVAKHKEQGDTQKPHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHM 319

  Fly   232 --------HPCPECEKKFTRNFQLKLHMTAVHGMGEMRYQCEECRKNFASRHSLRYHVKSVHSTE 288
                    |.||:|:|.|.....|:.|:.  ...||..|:|.:|.:.||....|:.|.: :|..|
  Fly   320 HTHDEEKGHKCPQCDKTFYTRGNLRAHIQ--RHTGERPYKCPDCPQTFAKNSGLKLHSR-LHKEE 381

  Fly   289 RPFGCQHCDRRFILRTQLLSHLRTHTGEAKPRIFECQRCSKSWPTKSDLRTHMRSHNPNMERPFK 353
            |||.|:.|.:.|:....|::|||.|.|:   |.|:|..|.||:..||::..|.|:|:.  .:|||
  Fly   382 RPFKCELCGKGFVQNQHLITHLRVHNGD---RQFKCPDCDKSFFEKSNMMKHQRTHSG--IKPFK 441

  Fly   354 CDRCSKAFFTRGHLNSHLLVHTGEKPFACEYCDKCYQSVGNLNNHMVRLHAD 405
            |:.|.:||....||.|||.:||||||:.|:.|.|.:.:..:|..|.: .|.|
  Fly   442 CEECGQAFSHNHHLKSHLRIHTGEKPYKCDQCGKGFSANQSLMKHTL-WHVD 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30431NP_610211.1 zf-AD 11..82 CDD:214871 18/82 (22%)
KREPA <181..>257 CDD:483960 21/141 (15%)
SFP1 <233..285 CDD:227516 16/51 (31%)
C2H2 Zn finger 234..255 CDD:275368 7/20 (35%)
C2H2 Zn finger 264..285 CDD:275368 6/20 (30%)
C2H2 Zn finger 293..313 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..344 CDD:275368 8/19 (42%)
C2H2 Zn finger 354..374 CDD:275368 9/19 (47%)
zf-H2C2_2 366..389 CDD:463886 14/22 (64%)
C2H2 Zn finger 382..403 CDD:275368 5/20 (25%)
MeicsNP_524062.1 zf-AD 20..95 CDD:462262 18/97 (19%)
C2H2 Zn finger 242..262 CDD:275368 2/19 (11%)
C2H2 Zn finger 274..294 CDD:275368 1/19 (5%)
SFP1 <296..374 CDD:227516 19/79 (24%)
COG5048 <299..486 CDD:227381 66/194 (34%)
C2H2 Zn finger 302..322 CDD:275368 2/19 (11%)
C2H2 Zn finger 330..350 CDD:275368 7/21 (33%)
C2H2 Zn finger 358..378 CDD:275368 6/20 (30%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
COG5048 <395..583 CDD:227381 42/104 (40%)
C2H2 Zn finger 414..434 CDD:275368 8/19 (42%)
C2H2 Zn finger 442..462 CDD:275368 9/19 (47%)
C2H2 Zn finger 470..486 CDD:275368 4/15 (27%)
C2H2 Zn finger 500..520 CDD:275368
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
Blue background indicates that the domain is not in the aligned region.

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