DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30431 and pita

DIOPT Version :10

Sequence 1:NP_610211.1 Gene:CG30431 / 35549 FlyBaseID:FBgn0050431 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster


Alignment Length:506 Identity:116/506 - (22%)
Similarity:189/506 - (37%) Gaps:147/506 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VCRCCLLEQPPLYHSLYD------ASSQLAVELKALAPALRLEHGDNLTDVICDLCLRRLHDARD 69
            |||.||.||.  ..|:::      .::.|.:::.|:. |:.:..||.:...||..|.........
  Fly    17 VCRFCLTEQK--LASIFEENPRVKTTANLPLQIMAIT-AIEVYAGDGMPGHICLECRLLFEHCYR 78

  Fly    70 FQRRCEHSEQVLRM--RHEHWK------------------------------------HTVAVGD 96
            |::.|:.:|.:||.  ...:|.                                    :|:|...
  Fly    79 FKQMCKRAETLLRQYPLTGNWPSPLEKPRAPMTMVASKKLLVVPAKTAEPSETPKKLLNTMAKSS 143

  Fly    97 ALALDDVLECLEREVGSLEGPMSVP--LQASKPV---AHVAPL-------METVDFESLDFQDSS 149
            :       :.:..:|..||..|..|  :..|.||   :|...|       :...|.:|:....:|
  Fly   144 S-------QVIIEDVQVLESAMVTPRTVAGSSPVPRRSHAYELKVDNNQELSMDDVQSMLEDMAS 201

  Fly   150 HSEHDIPSYWESSVDSGSLNTPHHQPETAELFAVEPPTPPESS---EEPAPDAAEKPKMRRARPR 211
            ..|.:.|..                |:.|.  .|:|....:||   ....|.|..:|::...:.:
  Fly   202 ELEKEFPDI----------------PQKAS--PVKPKVLNKSSIRILNKGPAAPVEPRLATPKVK 248

  Fly   212 QDN-----------------------VKPKERKASGAVHPRSLHPCPECEKKFTRNFQLKLHMTA 253
            :|:                       .|..|:.|:      .:.|||:||:.|.....|::|  .
  Fly   249 RDDSGNVAIVTEVLDSDLPLDDQDDPTKNAEKVAT------DVFPCPDCERSFPLQQLLEIH--R 305

  Fly   254 VHGMGEMRYQCEECRKNFASRHSLRYHVKSVHSTERPFGCQHCDRRFILRTQLLSHLRTHTG--- 315
            ::......:||..|.|:|.|::.|..| ..||:.||||.|..|.:.|..:..|..|.||||.   
  Fly   306 LNHTRSRSFQCLLCEKSFFSKYDLAKH-NFVHTGERPFKCAICSKAFTRKALLHRHERTHTDVPK 369

  Fly   316 ----------------------EAKPRIFECQRCSKSWPTKSDLRTHMRSHNPNMERPFKCDRCS 358
                                  ..|.|.|:|..|:||:..|..|..|...|:.|:  ||.|..|.
  Fly   370 FICVYCEKPFLSRQEMEKHAERHQKKRPFQCGVCTKSFAFKQGLERHETVHSTNL--PFPCQHCE 432

  Fly   359 KAFFTRGHLNSHLLVHTGEKPFACEYCDKCYQSVGNLNNHMVRLHADIIEA 409
            ::|.|...|..||:.|.|::.:.|:||.|.|....:|:.|: |.|....:|
  Fly   433 RSFSTASKLARHLVAHAGKRAYPCKYCHKSYMLSHHLSRHL-RTHTQTSDA 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30431NP_610211.1 zf-AD 11..82 CDD:214871 19/76 (25%)
KREPA <181..>257 CDD:483960 19/101 (19%)
SFP1 <233..285 CDD:227516 16/51 (31%)
C2H2 Zn finger 234..255 CDD:275368 7/20 (35%)
C2H2 Zn finger 264..285 CDD:275368 7/20 (35%)
C2H2 Zn finger 293..313 CDD:275368 6/19 (32%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 354..374 CDD:275368 7/19 (37%)
zf-H2C2_2 366..389 CDD:463886 9/22 (41%)
C2H2 Zn finger 382..403 CDD:275368 8/20 (40%)
pitaNP_611806.3 zf-AD 17..92 CDD:214871 20/77 (26%)
COG5048 <281..506 CDD:227381 65/214 (30%)
C2H2 Zn finger 288..308 CDD:275368 7/21 (33%)
C2H2 Zn finger 316..336 CDD:275368 7/20 (35%)
C2H2 Zn finger 344..364 CDD:275368 6/19 (32%)
C2H2 Zn finger 372..388 CDD:275370 0/15 (0%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
C2H2 Zn finger 428..448 CDD:275368 7/19 (37%)
C2H2 Zn finger 456..476 CDD:275368 8/20 (40%)
C2H2 Zn finger 486..506 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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