DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30431 and CG17328

DIOPT Version :10

Sequence 1:NP_610211.1 Gene:CG30431 / 35549 FlyBaseID:FBgn0050431 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster


Alignment Length:414 Identity:105/414 - (25%)
Similarity:156/414 - (37%) Gaps:143/414 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VCRCCLLEQPPLYHSLY--DASSQLAVELKALAPALRLEHGDNLTDVICDLCLRRLHDARDFQRR 73
            :||.||.|..|: .|:|  |.:...:|.|...| .:|:...|.|..|||:.|:.||..|..|::.
  Fly     8 ICRVCLEELHPV-TSIYSTDFAMMPSVMLMQCA-KIRVFKTDGLPSVICNNCIYRLGVAFHFKQE 70

  Fly    74 CEHSEQVLRMRH-----EHWKHTVAVGDALALDDVLECLEREVGSLEGPMSVPLQASKPVAHVAP 133
            ||:|:  ||:|.     |.|:...|.                                       
  Fly    71 CENSD--LRLRQYLGILESWRQDAAT--------------------------------------- 94

  Fly   134 LMETVDFESLDFQDSSHSEHDIPSYWESSVDSGSLNTPHHQPETAELFAVEPPTPP--ESSEEPA 196
                    :.||                                     ||.|..|  :|.||..
  Fly    95 --------NTDF-------------------------------------VEKPLLPQRDSDEEEP 114

  Fly   197 PDAAEKPKMRRARPRQDNVKPKERKASGAVHPRSLHPCPECEKKFTRNFQLKLHMTAVHGMGEMR 261
            .||    |:.:.|.|.....|:|.|..|   |:   |.|                       :|.
  Fly   115 VDA----KVSKRRSRYQRKPPEEHKKRG---PK---PVP-----------------------KMP 146

  Fly   262 YQCEECRKNFASRHSLRYHVKSVHSTERPFGCQHCDRRFILRTQLLSHLRTHTGEAKPRIFECQR 326
            :.|.||.|:|.....|..|::: |:.|:|:.|..|.:||..:..|..|.|||||: ||  |:|:.
  Fly   147 HTCYECHKSFKCIAQLTQHIRT-HTGEKPYQCSFCIQRFAQKYNLKVHERTHTGD-KP--FQCEI 207

  Fly   327 CSKSWPTKSDLRTHMRSHNPNMERPFKCDRCSKAFFTRGHLNSHLLVHTGEKPFACEYCDKCYQS 391
            |||.:....:.:.|.:.|..  .|...|..|.|.|:|.|.|:.|::.|||.|...|:.|.|.:..
  Fly   208 CSKQFSALGNFQAHQKIHLG--VRDQVCSLCQKGFYTAGDLSKHMITHTGIKNHHCDVCGKAFSR 270

  Fly   392 VGNLNNHMVRLHA-------DIIE 408
            ..::..|.::||.       ||::
  Fly   271 RRDMRTHKLKLHPLESSTNHDIVD 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30431NP_610211.1 zf-AD 11..82 CDD:214871 26/72 (36%)
KREPA <181..>257 CDD:483960 19/77 (25%)
SFP1 <233..285 CDD:227516 10/51 (20%)
C2H2 Zn finger 234..255 CDD:275368 1/20 (5%)
C2H2 Zn finger 264..285 CDD:275368 7/20 (35%)
C2H2 Zn finger 293..313 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
C2H2 Zn finger 354..374 CDD:275368 8/19 (42%)
zf-H2C2_2 366..389 CDD:463886 9/22 (41%)
C2H2 Zn finger 382..403 CDD:275368 4/20 (20%)
CG17328NP_609786.2 zf-AD 8..80 CDD:214871 28/75 (37%)
COG5048 146..>211 CDD:227381 27/68 (40%)
C2H2 Zn finger 149..169 CDD:275368 7/20 (35%)
C2H2 Zn finger 177..197 CDD:275368 7/19 (37%)
zf-H2C2_2 189..213 CDD:463886 14/26 (54%)
C2H2 Zn finger 205..225 CDD:275368 5/19 (26%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
zf-H2C2_2 245..270 CDD:463886 9/24 (38%)
C2H2 Zn finger 261..282 CDD:275368 4/20 (20%)
C2H2 Zn finger 318..338 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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