DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30431 and prg

DIOPT Version :10

Sequence 1:NP_610211.1 Gene:CG30431 / 35549 FlyBaseID:FBgn0050431 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster


Alignment Length:480 Identity:115/480 - (23%)
Similarity:185/480 - (38%) Gaps:107/480 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CRCCLLEQPPLYHSLYDASSQLA--VELKALAPAL---RLEHGDNLTDVICDLCLRRLHDARDFQ 71
            ||.|.....|...:::|.:.|..  |.:..::.:|   :.:..:.|:::||..||..|.:|.:.:
  Fly    17 CRLCHHNTDPNSLNIFDDTVQFCKDVSIAEVSKSLWSVQYDRNECLSELICSRCLEILEEAFELR 81

  Fly    72 RRCEHSEQVLR-----MRHEHWKHTVAV-GDALALDDVLECLEREVGSLEGPMSVPLQASKPVAH 130
            :..:..||.|:     |..:|.||...: |:.........|:..||    .|.::...:.:..| 
  Fly    82 KGMQEREQSLQEQLKEMIKDHPKHRPGLNGNPGVFVPEEGCIIVEV----DPENLAESSEEEFA- 141

  Fly   131 VAPLMETVDFESLDFQDSSHSEHDIPSYWESSVDSGSLNTPHHQPETAELFAVEPPTPPESSEEP 195
               |....::|:.|..|....|    .|.|...:.|         :..|  .|:.|...::::..
  Fly   142 ---LGSDGEYENYDDDDEEEEE----DYDEEDEEDG---------QNGE--DVDMPLGMDAAQMA 188

  Fly   196 APDA-AEKPKMRRARPRQ---------DNVKPKE-RKASGAVH-PRSLHPCPECEKKFTRNFQLK 248
            |..: |.......|||::         ....|.| ::...|.| |.:.:.|..|..|......|.
  Fly   189 AQQSVANNANTTEARPKRAFLCQYCDLGFTLPAECQEHELAAHDPNAPYCCNFCNIKLVTRPALI 253

  Fly   249 LHMTAVHGMGEMRYQCEECRKNFASRHSLRYHVKSVHSTERPFGCQHCDRRFILRTQLLSHLRTH 313
            .|:..:|. .:..|.|..|||.|..|..|:.|. .||:..|||.|..|.:.|...|.|..|:|.|
  Fly   254 SHIKTLHD-PDRPYVCAHCRKGFVRRSDLKKHT-IVHTGVRPFTCNVCSKSFSRNTNLTKHMRIH 316

  Fly   314 TGEAKPRIFECQRCSKSWPTKSDLRTHMRSHNPNMERPFKCDRCSKAFFTRGHLNSHLLVHT--- 375
            :| .||  |.||:|.:|:.|..::..|.|||..  .:.|:|.||..:|..|..|.:|..|||   
  Fly   317 SG-VKP--FVCQQCPRSFQTAVEMMRHTRSHGE--VKAFQCGRCPYSFSRRDKLIAHQQVHTRRD 376

  Fly   376 ---------------------------------GEKPFACEYCDKCYQSVGNLNNHMVRLHADII 407
                                             ..:.:.|:.||:.:|...:|..|.. ||.|.:
  Fly   377 MEQQQQMGLIPPMEGDLQQQALQAKQKAAAQTKNSRYYHCDVCDRTFQRERDLQRHQA-LHMDSL 440

  Fly   408 EA-----------------QLEAEG 415
            .|                 :|||.|
  Fly   441 FACKTCNQGFNRREQLQRHELEAHG 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30431NP_610211.1 zf-AD 11..82 CDD:214871 17/74 (23%)
KREPA <181..>257 CDD:483960 18/87 (21%)
SFP1 <233..285 CDD:227516 15/51 (29%)
C2H2 Zn finger 234..255 CDD:275368 5/20 (25%)
C2H2 Zn finger 264..285 CDD:275368 8/20 (40%)
C2H2 Zn finger 293..313 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 354..374 CDD:275368 7/19 (37%)
zf-H2C2_2 366..389 CDD:463886 8/58 (14%)
C2H2 Zn finger 382..403 CDD:275368 6/20 (30%)
prgNP_609232.2 zf-AD 16..94 CDD:462262 18/76 (24%)
COG5048 <212..340 CDD:227381 42/132 (32%)
C2H2 Zn finger 239..260 CDD:275368 5/20 (25%)
C2H2 Zn finger 268..288 CDD:275368 8/20 (40%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 352..372 CDD:275368 7/19 (37%)
C2H2 Zn finger 416..436 CDD:275368 6/20 (30%)
C2H2 Zn finger 443..464 CDD:275368 2/20 (10%)
C2H2 Zn finger 470..490 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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